RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 PAK5Q9P286 719 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 NFU1Q9UMS0 254 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 A0A1B0GVM2 712 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 TCAF2A6NFQ2 919 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 C5orf60A6NFR6 353 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ARHGAP42A6NI28 874 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 GFRA2O00451 464 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 GCATO75600 419 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 MYBL2P10244 700 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ETS1P14921 441 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 VAV1P15498 845 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 POU3F3P20264 500 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 CCNCP24863 283 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ECHS1P30084 290 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 OR1E1P30953 314 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 CHKAP35790 457 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 VPS41P49754 854 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 IRAK1P51617 712 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 CLCN6P51797 869 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 MLLT1Q03111 559 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 GPS1Q13098 491 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ADAM15Q13444 863 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 TRADDQ15628 312 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 PARP15Q460N3 678 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 TFAP2DQ7Z6R9 452 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ATPAF2Q8N5M1 289 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 AENQ8WTP8 325 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 ART4Q93070 314 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 FATE1Q969F0 183 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 P2RY11Q96G91 374 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 CELF6Q96J87 481 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 PRICKLE1Q96MT3 831 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 VAT1Q99536 393 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 SLC39A8Q9C0K1 460 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ARFGAP3Q9NP61 516 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 ZDHHC18Q9NUE0 388 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 NDFIP2Q9NV92 336 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 MTRF1LQ9UGC7 380 aaKnown RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
PKP4-215ENST00000494945 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
PKP4-215ENST00000494945 A0A0A0MRY4 1105 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 SMAPO00193 183 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 RNF103O00237 685 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 DFFAO00273 331 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 LINC01565O15544 149 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 OPHN1O60890 802 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 RAMP2O60895 175 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ZSCAN5DPP0CG00 497 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 FSHRP23945 695 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ITGA8P53708 1063 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 PLTPP55058 493 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 RPS24P62847 133 aaKnown RBP11.3□□□□□ -0.6
PKP4-215ENST00000494945 USP4Q13107 963 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 MORF4L2Q15014 288 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 POLD3Q15054 466 aaPredicted RBP11.3□□□□□ -0.6
PKP4-215ENST00000494945 C6orf118Q5T5N4 469 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 SYCE2Q6PIF2 218 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ZDHHC24Q6UX98 284 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ZNF783Q6ZMS7 281 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
PKP4-215ENST00000494945 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 CCDC33Q8N5R6 958 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 NETO2Q8NC67 525 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ITFG1Q8TB96 612 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ING5Q8WYH8 240 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 CAVIN3Q969G5 261 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 SPATA13Q96N96 652 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 FMO2Q99518 471 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 MAGEH1Q9H213 219 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 TBC1D14Q9P2M4 693 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 ANAPC5Q9UJX4 755 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 TRHDEQ9UKU6 1024 aa11.3□□□□□ -0.6
PKP4-215ENST00000494945 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
PKP4-215ENST00000494945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
PKP4-215ENST00000494945 RASA4BC9J798 803 aa11.29□□□□□ -0.6
PKP4-215ENST00000494945 RASA4O43374 803 aa11.29□□□□□ -0.6
PKP4-215ENST00000494945 MAFKO60675 156 aa11.29□□□□□ -0.6
PKP4-215ENST00000494945 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
PKP4-215ENST00000494945 FDFT1P37268 417 aa11.29□□□□□ -0.6
PKP4-215ENST00000494945 ETFBP38117 255 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms