RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 HMGB4Q8WW32 186 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 SCLT1Q96NL6 688 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 ABHD14AQ9BUJ0 271 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 BRD8Q9H0E9 1235 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 ZBTB40Q9NUA8 1239 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 LIN7CQ9NUP9 197 aaKnown RBP3.59□□□□□ -1.83
CLHC1-213ENST00000494539 GRHPRQ9UBQ7 328 aa3.59□□□□□ -1.83
CLHC1-213ENST00000494539 TRPC5Q9UL62 973 aaPredicted RBP3.59□□□□□ -1.83
CLHC1-213ENST00000494539 MORC2Q9Y6X9 1032 aaPredicted RBP3.59□□□□□ -1.83
CLHC1-213ENST00000494539 CYP3A7-CYP3A51PA0A087WV96 503 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3DA0A087WVF3 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3IA0A087WXS9 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3EA0A087X179 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3KA0A087X1G2 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 KIR2DS5A0A0G2JLQ3 304 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 hCG_1642624A0A1W2PR95 340 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3BA6NDS4 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3FA6NER0 549 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 FAM90A8PA6NJQ4 464 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3LB9A6J9 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 KIR2DS3K7RE56 304 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TIMM44O43615 452 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 ALDOAP04075 364 aaKnown RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 LDHCP07864 332 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 FAM90A13PP0C7W8 464 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 FAM90A24PP0C7X0 464 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3HP0C7X1 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 PTMSP20962 102 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TGM2P21980 687 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 CYP3A7P24462 503 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 GRK5P34947 590 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 INPP5JQ15735 1006 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 PDCD2Q16342 344 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 MIDNQ504T8 468 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TTC22Q5TAA0 569 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3GQ6DHY5 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3CQ6IPX1 549 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TMEM88Q6PEY1 159 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 C9orf47Q6ZRZ4 202 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 RFX8Q6ZV50 586 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 TBC1D3Q8IZP1 549 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 NKAPQ8N5F7 415 aaKnown RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 OR52N4Q8NGI2 321 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 SLC25A28Q96A46 364 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 LTV1Q96GA3 475 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 CLMNQ96JQ2 1002 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 PIMREGQ9BSJ6 248 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 DDX23Q9BUQ8 820 aaKnown RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 SORBS1Q9BX66 1292 aaKnown RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 MLXIPQ9HAP2 919 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 THSD1Q9NS62 852 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 MSRB1Q9NZV6 116 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 PGAP2Q9UHJ9 254 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 PCDHA12Q9UN75 941 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 C19orf53Q9UNZ5 99 aaPredicted RBP3.58□□□□□ -1.84
CLHC1-213ENST00000494539 DGKBQ9Y6T7 804 aa3.58□□□□□ -1.84
CLHC1-213ENST00000494539 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 ZNF814B7Z6K7 855 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 CCER2I3L3R5 266 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 CNTN5O94779 1100 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 NDUFB8O95169 186 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 VEGFAP15692 232 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 TKTP29401 623 aaKnown RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 KCNJ4P48050 445 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 GEMIN4P57678 1058 aaKnown RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 SHC2P98077 582 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 KCTD2Q14681 263 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 PRTGQ2VWP7 1150 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 TBRG1Q3YBR2 411 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 C6orf10Q5SRN2 563 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 JMJD6Q6NYC1 403 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 RINLQ6ZS11 566 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 B4GALNT4Q76KP1 1039 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 ZNF354CQ86Y25 554 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 DDIASQ8IXT1 998 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 ADGRF3Q8IZF5 1079 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 MYCT1Q8N699 235 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 ARL14EPQ8N8R7 260 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 CLEC4CQ8WTT0 213 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 CPT1BQ92523 772 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 CENPIQ92674 756 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 LYZL4Q96KX0 146 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 MARK4Q96L34 752 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 TRAPPC9Q96Q05 1148 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 WDR83Q9BRX9 315 aaKnown RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 TASP1Q9H6P5 420 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 ELAC1Q9H777 363 aaKnown RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 SFXN1Q9H9B4 322 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 FZD3Q9NPG1 666 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 C9orf78Q9NZ63 289 aaPredicted RBP3.57□□□□□ -1.84
CLHC1-213ENST00000494539 COG5Q9UP83 839 aa3.57□□□□□ -1.84
CLHC1-213ENST00000494539 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
CLHC1-213ENST00000494539 HMX3A6NHT5 357 aa3.56□□□□□ -1.84
CLHC1-213ENST00000494539 IPO5O00410 1097 aaKnown RBP3.56□□□□□ -1.84
CLHC1-213ENST00000494539 EPN2O95208 641 aa3.56□□□□□ -1.84
CLHC1-213ENST00000494539 ALDOCP09972 364 aaKnown RBP3.56□□□□□ -1.84
CLHC1-213ENST00000494539 TNFRSF1BP20333 461 aa3.56□□□□□ -1.84
CLHC1-213ENST00000494539 CST5P28325 142 aaPredicted RBP3.56□□□□□ -1.84
CLHC1-213ENST00000494539 CIITAP33076 1130 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms