RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 MLPHQ9BV36 600 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-225ENST00000494465 UBE2OQ9C0C9 1292 aaKnown RBP16.93■□□□□ 0.3
ATG4B-225ENST00000494465 NOL6Q9H6R4 1146 aaKnown RBP16.93■□□□□ 0.3
ATG4B-225ENST00000494465 CCSER2Q9H7U1 834 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 MLXIPLQ9NP71 852 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 VANGL2Q9ULK5 521 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 SPAG7O75391 227 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 SEC24AO95486 1093 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 AP2A1O95782 977 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 TIMP1P01033 207 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 JCHAINP01591 159 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 SOD2P04179 222 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 STEAP4Q687X5 459 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 C4orf33Q8N1A6 199 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 GSDMBQ8TAX9 411 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 DENND1AQ8TEH3 1009 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 FAM107BQ9H098 131 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 KIAA1671Q9BY89 1806 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 SDR42E2A6NKP2 422 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 TYROBPO43914 113 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 CACNG3O60359 315 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 ABLIM3O94929 683 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 NFKB1P19838 968 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 MGAT1P26572 445 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 SLC18A1P54219 525 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 KLHDC8BQ8IXV7 354 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 STAMBPL1Q96FJ0 436 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 BTN2A3PQ96KV6 586 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 CEP295NLQ96MC4 621 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 MOCS1Q9NZB8 636 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 MAGED2Q9UNF1 606 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 IGLV3-10A0A075B6K4 115 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 FAM159BA6NKW6 160 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 TLR5O60602 858 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 SESN2P58004 480 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 WDR5P61964 334 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 DSG1Q02413 1049 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 KIAA1841Q6NSI8 718 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 ATPAF2Q8N5M1 289 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 OXNAD1Q96HP4 312 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 SMC6Q96SB8 1091 aa16.92■□□□□ 0.3
ATG4B-225ENST00000494465 PPARGC1AQ9UBK2 798 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 AFF4Q9UHB7 1163 aaKnown RBP16.92■□□□□ 0.3
ATG4B-225ENST00000494465 SLC12A8A0AV02 714 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 FAM155BO75949 473 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 CCNB1P14635 433 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 RING1Q06587 406 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 SPOUT1Q5T280 376 aaKnown RBP16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ITPRIPL1Q6GPH6 555 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 CYS1Q717R9 158 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 LRRC6Q86X45 466 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ATP6V0D2Q8N8Y2 350 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 OR52K1Q8NGK4 314 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 SYBUQ9NX95 663 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ARHGAP42A6NI28 874 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 KIAA0355O15063 1070 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 USP12O75317 370 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 CNTN5O94779 1100 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ALDH1A2O94788 518 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 INHBAP08476 426 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 HMGA1P17096 107 aaKnown RBP16.91■□□□□ 0.3
ATG4B-225ENST00000494465 KRT4P19013 534 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ALFQ53S48 1182 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 SLC26A11Q86WA9 606 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 UMODL1-AS1Q8N2C9 162 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 PPM1NQ8N819 430 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 CKAP2Q8WWK9 683 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 SSU72Q9NP77 194 aaKnown RBP16.91■□□□□ 0.3
ATG4B-225ENST00000494465 CASS4Q9NQ75 786 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF212Q9UDV6 495 aa16.91■□□□□ 0.3
ATG4B-225ENST00000494465 ERI2A8K979 691 aaKnown RBP16.9■□□□□ 0.3
ATG4B-225ENST00000494465 MATN3O15232 486 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 UGT1A9O60656 530 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 HMBSP08397 361 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 CSH1P0DML2 217 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 CSH2P0DML3 217 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 RPA3P35244 121 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-225ENST00000494465 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 NUGGCQ68CJ6 796 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 FBXL22Q6P050 247 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 SH2D5Q6ZV89 423 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 OTOP3Q7RTS5 596 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 UNC5BQ8IZJ1 945 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 IGSF8Q969P0 613 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 ZYG11BQ9C0D3 744 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms