RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 CPQQ9Y646 472 aa7.22□□□□□ -1.25
EPHA3-203ENST00000494014 CROCCQ5TZA2 2017 aa7.22□□□□□ -1.25
EPHA3-203ENST00000494014 TRIM64A6NGJ6 449 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 ADAMTS4O75173 837 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 GCATO75600 419 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 BCAS2O75934 225 aaPredicted RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 IFNB1P01574 187 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 ENDOUP21128 410 aaKnown RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 PROZP22891 400 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 MRPS5P82675 430 aaKnown RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 GALNT2Q10471 571 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 ITGADQ13349 1161 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 PPP2R5DQ14738 602 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 AARS2Q5JTZ9 985 aaKnown RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 LRRC38Q5VT99 294 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 WDR78Q5VTH9 848 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 LILRB4Q8NHJ6 448 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 HPS1Q92902 700 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 KAT5Q92993 513 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 SLITRK1Q96PX8 696 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 TUBA1CQ9BQE3 449 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 WDR83Q9BRX9 315 aaKnown RBP7.21□□□□□ -1.25
EPHA3-203ENST00000494014 HOMER2Q9NSB8 354 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 FEM1BQ9UK73 627 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 CDC14AQ9UNH5 594 aa7.21□□□□□ -1.25
EPHA3-203ENST00000494014 A0A1W2PPW3 197 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 NOTOA8MTQ0 251 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KBTBD13C9JR72 458 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SLC22A2O15244 555 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 S100BP04271 92 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KRT5P13647 590 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ATF7P17544 494 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ME2P23368 584 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 GRK2P25098 689 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 IDH3AP50213 366 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PEX3P56589 373 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PPP3CAQ08209 521 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KLF10Q13118 480 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ALCAMQ13740 583 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ZNF846Q147U1 533 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 TMEM132BQ14DG7 1078 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 DGKDQ16760 1214 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PIGGQ5H8A4 983 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 FAM209AQ5JX71 171 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 CES4AQ5XG92 561 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KAZNQ674X7 775 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ENOSF1Q7L5Y1 443 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SIX6OS1Q8N1H7 587 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SLC15A4Q8N697 577 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KYQ8NBH2 561 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 OR7G1Q8NGA0 311 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SLC35B2Q8TB61 432 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 VCPIP1Q96JH7 1222 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 C20orf27Q9GZN8 174 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 CDH19Q9H159 772 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ZNF395Q9H8N7 513 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 MRPL40Q9NQ50 206 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KCND2Q9NZV8 630 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PRELID1Q9Y255 219 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ATP11BQ9Y2G3 1177 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 C7orf72A4D263 438 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 TRDMT1O14717 391 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 TOM1L1O75674 476 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 CHEK2O96017 543 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KRT1P04264 644 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 AKR1B1P15121 316 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 NCF2P19878 526 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 NSFP46459 744 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 GCLMP48507 274 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SLC1A6P48664 564 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SERPINB9P50453 376 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 CTBSQ01459 385 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KRT76Q01546 638 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 BNIP3Q12983 259 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ANKRD22Q5VYY1 191 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PPP2R2DQ66LE6 453 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 LINC00299Q6ZSB3 139 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 FAM160B2Q86V87 743 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 IGFN1Q86VF2 1251 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 TTC30BQ8N4P2 665 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 BHLHE22Q8NFJ8 381 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 NT5C1BQ96P26 610 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 ZNF347Q96SE7 839 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 NPLQ9BXD5 320 aaPredicted RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 CEP44Q9C0F1 390 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 KATNBL1Q9H079 304 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 PDLIM7Q9NR12 457 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 DDX56Q9NY93 547 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 HACD3Q9P035 362 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 IP6K2Q9UHH9 426 aa7.21□□□□□ -1.26
EPHA3-203ENST00000494014 IPO11Q9UI26 975 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 XPO7Q9UIA9 1087 aaKnown RBP7.21□□□□□ -1.26
EPHA3-203ENST00000494014 LOC100653049A0A140TA62 436 aa7.2□□□□□ -1.26
EPHA3-203ENST00000494014 GOLGA8CPA6NN73 597 aa7.2□□□□□ -1.26
EPHA3-203ENST00000494014 TTC34A8MYJ7 566 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms