RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ENPP2Q13822 863 aa12□□□□□ -0.49
UBA3-211ENST00000493957 DSG2Q14126 1118 aa12□□□□□ -0.49
UBA3-211ENST00000493957 EIF4HQ15056 248 aaKnown RBP12□□□□□ -0.49
UBA3-211ENST00000493957 CA9Q16790 459 aa12□□□□□ -0.49
UBA3-211ENST00000493957 PITRM1Q5JRX3 1037 aa12□□□□□ -0.49
UBA3-211ENST00000493957 EOGTQ5NDL2 527 aa12□□□□□ -0.49
UBA3-211ENST00000493957 TTC39BQ5VTQ0 682 aaPredicted RBP12□□□□□ -0.49
UBA3-211ENST00000493957 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
UBA3-211ENST00000493957 AHI1Q8N157 1196 aa12□□□□□ -0.49
UBA3-211ENST00000493957 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
UBA3-211ENST00000493957 TSTD1Q8NFU3 115 aa12□□□□□ -0.49
UBA3-211ENST00000493957 ALG14Q96F25 216 aa12□□□□□ -0.49
UBA3-211ENST00000493957 TRIM11Q96F44 468 aa12□□□□□ -0.49
UBA3-211ENST00000493957 GABRG3Q99928 467 aa12□□□□□ -0.49
UBA3-211ENST00000493957 NUP85Q9BW27 656 aa12□□□□□ -0.49
UBA3-211ENST00000493957 DEF6Q9H4E7 631 aa12□□□□□ -0.49
UBA3-211ENST00000493957 NHEJ1Q9H9Q4 299 aaPredicted RBP12□□□□□ -0.49
UBA3-211ENST00000493957 CD93Q9NPY3 652 aa12□□□□□ -0.49
UBA3-211ENST00000493957 ZNHIT6Q9NWK9 470 aaKnown RBP12□□□□□ -0.49
UBA3-211ENST00000493957 PCSK1NQ9UHG2 260 aa12□□□□□ -0.49
UBA3-211ENST00000493957 FZD10Q9ULW2 581 aa12□□□□□ -0.49
UBA3-211ENST00000493957 INVSQ9Y283 1065 aa12□□□□□ -0.49
UBA3-211ENST00000493957 PAXBP1Q9Y5B6 917 aa12□□□□□ -0.49
UBA3-211ENST00000493957 EP300Q09472 2414 aaPredicted RBP12□□□□□ -0.49
UBA3-211ENST00000493957 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 AKR1B10O60218 316 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 LRIG2O94898 1065 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 GABRG2P18507 467 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 HOXA6P31267 233 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 PLA2G5P39877 138 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 STK19P49842 368 aaPredicted RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 SCAPQ12770 1279 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 LPAL2Q16609 132 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 PLEKHG6Q3KR16 790 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 HSF5Q4G112 596 aaPredicted RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 FNDC3BQ53EP0 1204 aaKnown RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 RNF219Q5W0B1 726 aaPredicted RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 WDR5BQ86VZ2 330 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 LONP2Q86WA8 852 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 RASSF3Q86WH2 238 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 FRMD1Q8N878 549 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 CCDC26Q8TAB7 109 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 HMGB4Q8WW32 186 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 NTAN1Q96AB6 310 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 MYO19Q96H55 970 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 MRGPRX3Q96LB0 322 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 C1orf74Q96LT6 269 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 PSMB7Q99436 277 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 SNRNP25Q9BV90 132 aaKnown RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 OSBPL2Q9H1P3 480 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 NDFIP2Q9NV92 336 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 KIAA1522Q9P206 1035 aaPredicted RBP11.99□□□□□ -0.49
UBA3-211ENST00000493957 OR12D3Q9UGF7 316 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 ANAPC7Q9UJX3 599 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 PCDHGA2Q9Y5H1 932 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 OR51B4Q9Y5P0 310 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 SCINQ9Y6U3 715 aa11.99□□□□□ -0.49
UBA3-211ENST00000493957 USP34Q70CQ2 3546 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 FRYLO94915 3013 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ADAMTS9Q9P2N4 1935 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 DCLK1O15075 740 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 AXIN1O15169 862 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 LRCH4O75427 683 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 DLDP09622 509 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 POLR2EP19388 210 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 IL1R2P27930 398 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 MIPP30301 263 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 DGKEP52429 567 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 CDH4P55283 916 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 MTA1Q13330 715 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ZNF177Q13360 481 aaPredicted RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 ARL13BQ3SXY8 428 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 TXNRD3NBQ6F5E7 133 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 SERPINA13PQ6UXR4 307 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 TRMT11Q7Z4G4 463 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 SLFN11Q7Z7L1 901 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 SPC24Q8NBT2 197 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 OR7D4Q8NG98 312 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 FNIP1Q8TF40 1166 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 UCMAQ8WVF2 138 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ATRIPQ8WXE1 791 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 RLN3Q8WXF3 142 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 RPL10LQ96L21 214 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 CCDC42Q96M95 316 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 FAM126AQ9BYI3 521 aaPredicted RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 TMEM245Q9H330 911 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 MRPL47Q9HD33 250 aaKnown RBP11.98□□□□□ -0.49
UBA3-211ENST00000493957 TFR2Q9UP52 801 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 ERVW-1Q9UQF0 538 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 TBC1D30Q9Y2I9 924 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
UBA3-211ENST00000493957 A0A0D9SEW6 157 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms