RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 DENND2CQ68D51 928 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 TMEM81Q6P7N7 255 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 GJB7Q6PEY0 223 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 GDF7Q7Z4P5 450 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 GALNT7Q86SF2 657 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 ZSCAN30Q86W11 494 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 TMPRSS6Q8IU80 811 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 TMEM116Q8NCL8 245 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 ADPRHL1Q8NDY3 354 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 SRFBP1Q8NEF9 429 aaKnown RBP4.75□□□□□ -1.65
GTF3A-208ENST00000493903 FEZF2Q8TBJ5 459 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 SMARCE1Q969G3 411 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 PGAM5Q96HS1 289 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 LBHD1Q9BQE6 289 aaPredicted RBP4.75□□□□□ -1.65
GTF3A-208ENST00000493903 HTATIP2Q9BUP3 242 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 STRA6Q9BX79 667 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 MEGF9Q9H1U4 602 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 SH2D4AQ9H788 454 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 PARD6AQ9NPB6 346 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 ABCF3Q9NUQ8 709 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 GIMAP4Q9NUV9 329 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 EIF2B4Q9UI10 523 aaKnown RBP4.75□□□□□ -1.65
GTF3A-208ENST00000493903 GABRQQ9UN88 632 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 PCDHB2Q9Y5E7 798 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 NOX1Q9Y5S8 564 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 FAM169AQ9Y6X4 670 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 SMARCA4P51532 1647 aa4.75□□□□□ -1.65
GTF3A-208ENST00000493903 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 FAM237BA0A1B0GVD1 139 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GAGE12HA6NDE8 117 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 TTC36A6NLP5 189 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GRXCR1A8MXD5 290 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 A8MZ25 164 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 PI4K2BG5E9Z4 385 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 TP73O15350 636 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 CYP27B1O15528 508 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 NOBOXO60393 691 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 PDE8BO95263 885 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 PRPH2P23942 346 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GJC1P36383 396 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 LMAN1P49257 510 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 RAD23AP54725 363 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 NXPH1P58417 271 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 ABHD18Q0P651 414 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 BYSLQ13895 437 aaKnown RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 IRF3Q14653 427 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GSTA3Q16772 222 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 DPCR1Q3MIW9 517 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 CCDC92Q53HC0 331 aaPredicted RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 BMP2KLQ5H9B9 411 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SH2D4BQ5SQS7 431 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF618Q5T7W0 954 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 HMBOX1Q6NT76 420 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 TTI2Q6NXR4 508 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SLC39A5Q6ZMH5 540 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 TTLL10Q6ZVT0 673 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 POLNQ7Z5Q5 900 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SLFN11Q7Z7L1 901 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 CREBRFQ8IUR6 639 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SCN4BQ8IWT1 228 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 ARHGAP12Q8IWW6 846 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SCML4Q8N228 414 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 CHCHD4Q8N4Q1 142 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 POMGNT2Q8NAT1 580 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 C11orf65Q8NCR3 313 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 KCNJ9Q92806 393 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF653Q96CK0 615 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 GPR87Q9BY21 358 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 RNF26Q9BY78 433 aaPredicted RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 MRPL9Q9BYD2 267 aaKnown RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SAP30LQ9HAJ7 183 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 ATP8A2Q9NTI2 1148 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 SPATS2LQ9NUQ6 558 aaKnown RBP4.74□□□□□ -1.65
GTF3A-208ENST00000493903 IL1RAPL1Q9NZN1 696 aa4.74□□□□□ -1.65
GTF3A-208ENST00000493903 C17orf113A0A1B0GUU1 675 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 OTOL1A6NHN0 477 aaPredicted RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 MARCH11A6NNE9 402 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 A8MXE2 369 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CDRT15L2A8MXV6 281 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 MUSKO15146 869 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 LDLRAD4O15165 306 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 ADAM20O43506 726 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CA12O43570 354 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 HNRNPCL1O60812 293 aaKnown RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 TBX10O75333 385 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 ENTPD3O75355 529 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 OR2C1O95371 312 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 DLDP09622 509 aaKnown RBP4.73□□□□□ -1.65
GTF3A-208ENST00000493903 TGFB3P10600 412 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PEPDP12955 493 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 LYL1P12980 280 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PPP3CBP16298 524 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CXCR5P32302 372 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 PBX3P40426 434 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 HSD17B4P51659 736 aa4.73□□□□□ -1.65
GTF3A-208ENST00000493903 CDH8P55286 799 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms