RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SRGAP2O75044 1071 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ADAM23O75077 832 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ATP5BP06576 529 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 PLEKP08567 350 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 HNRNPLP14866 589 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 PSMA2P25787 234 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 PTPN9P43378 593 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ADKP55263 362 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 GSCP56915 257 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ST8SIA6P61647 398 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 RPL7AP62424 266 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 LMAN2Q12907 356 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 FOXC1Q12948 553 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ZNF177Q13360 481 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 ZNF234Q14588 700 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 STARD3Q14849 445 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 FUT11Q495W5 492 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 RAB6CQ53S08 254 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 TTC39BQ5VTQ0 682 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 RNF219Q5W0B1 726 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 HGSNATQ68CP4 663 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 TMEM215Q68D42 235 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 KIAA1324Q6UXG2 1013 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 C14orf80Q86SX3 495 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 CCAR2Q8N163 923 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 FIBINQ8TAL6 211 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 IGSF8Q969P0 613 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 VCPIP1Q96JH7 1222 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 PRMT1Q99873 361 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 RAB6CQ9H0N0 254 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 TMEM51Q9NW97 253 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 KIAA1522Q9P206 1035 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 HCN2Q9UL51 889 aa10.73□□□□□ -0.69
TRAPPC12-222ENST00000493792 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 E9PAM4 449 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 TAF4O00268 1085 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CDX4O14627 284 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 NPC1O15118 1278 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CAPNS1P04632 268 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 EPHX1P07099 455 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 GZMAP12544 262 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CEACAM1P13688 526 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 HLA-EP13747 358 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 EIF4A3P38919 411 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CSKP41240 450 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 IL12RB1P42701 662 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 IRAK1P51617 712 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 ZNF143P52747 638 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 ZNF252P-AS1Q0IIN9 211 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 MAMLD1Q13495 774 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 FSCBQ5H9T9 825 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 PITRM1Q5JRX3 1037 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CCDC122Q5T0U0 273 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 STRADAQ7RTN6 431 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 ZNF366Q8N895 744 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 OLIG1Q8TAK6 271 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 COL26A1Q96A83 441 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 CNPY3Q9BT09 278 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 ANLNQ9NQW6 1124 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 MPP6Q9NZW5 540 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 THAP10Q9P2Z0 257 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 SCINQ9Y6U3 715 aa10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 DSPP15924 2871 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-222ENST00000493792 A0A087X0T9 212 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 TCRBV5S1A1TA0A578 114 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 I6L893 689 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 DCLK1O15075 740 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 MAP3K13O43283 966 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 AP5Z1O43299 807 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 MFAP3LO75121 409 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 CLDN11O75508 207 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 RNF8O76064 485 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 CNTN5O94779 1100 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 ENDOD1O94919 500 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 RHOCP08134 193 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 DLDP09622 509 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 FAM228BP0C875 321 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 MYBL1P10243 752 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 PRKCHP24723 683 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 ADRA1BP35368 520 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 CDH4P55283 916 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 OXCT1P55809 520 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 HDAC4P56524 1084 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 AKAP13Q12802 2813 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 USP39Q53GS9 565 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 ALFQ53S48 1182 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 EFHC2Q5JST6 749 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 PLEKHA7Q6IQ23 1121 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 KIAA1211LQ6NV74 962 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 RWDD4Q6NW29 188 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 ALKBH5Q6P6C2 394 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 SARM1Q6SZW1 724 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 TFAP2DQ7Z6R9 452 aa10.71□□□□□ -0.69
TRAPPC12-222ENST00000493792 SLFN11Q7Z7L1 901 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms