RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NFATC1O95644 943 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 RRM1P23921 792 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 GJA4P35212 333 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 GALK1P51570 392 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 TKTL1P51854 596 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 FAM102AQ5T9C2 384 aaPredicted RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 STPG1Q5TH74 334 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 LYPD4Q6UWN0 246 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 FAM183BPQ6ZVS7 135 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 GPRIN1Q7Z2K8 1008 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 ARL14EPQ8N8R7 260 aaPredicted RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 C12orf50Q8NA57 414 aaPredicted RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 CD101Q93033 1021 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 TTLL2Q9BWV7 592 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 PCDHGA5Q9Y5G8 931 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 AKAP13Q12802 2813 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 FREM2Q5SZK8 3169 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SLC9A3R1O14745 358 aaPredicted RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SART1O43290 800 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 KRT86O43790 486 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 KCNK5O95279 499 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 EGFP01133 1207 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 NOP2P46087 812 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 GABRB2P47870 512 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 IDH3AP50213 366 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 PTP4A2Q12974 167 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SYT13Q7L8C5 426 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 TMEM110Q86TL2 294 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 ZDHHC17Q8IUH5 632 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 ETFBKMTQ8IXQ9 262 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 RFFLQ8WZ73 363 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 GOLGA1Q92805 767 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 ARHGEF26Q96DR7 871 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SLC22A12Q96S37 553 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 CYP2S1Q96SQ9 504 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 ULBP1Q9BZM6 244 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 MRPL47Q9HD33 250 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 PARVAQ9NVD7 372 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 CHORDC1Q9UHD1 332 aaPredicted RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 GON4LQ3T8J9 2241 aa12.62□□□□□ -0.39
UPF3A-210ENST00000493727 SMG1Q96Q15 3661 aaKnown RBP12.62□□□□□ -0.39
UPF3A-210ENST00000493727 THADAQ6YHU6 1953 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PI4KAP42356 2102 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 GOLGA6L9A6NEM1 432 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PJA2O43164 708 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PAPSS1O43252 624 aaPredicted RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 ZBED1O96006 694 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 CYP1A2P05177 515 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PROS1P07225 676 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 MPLP40238 635 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 SLC7A9P82251 487 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 SLC6A3Q01959 620 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 C11orf74Q86VG3 221 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 RHOT2Q8IXI1 618 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 C3orf20Q8ND61 904 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 PDZD8Q8NEN9 1154 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 SCAMP5Q8TAC9 235 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 FBXO32Q969P5 355 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 SMOC1Q9H4F8 434 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 METTL5Q9NRN9 209 aaKnown RBP12.61□□□□□ -0.39
UPF3A-210ENST00000493727 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 UVRAGQ9P2Y5 699 aa12.61□□□□□ -0.39
UPF3A-210ENST00000493727 GUCA1BQ9UMX6 200 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms