RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IQCHQ86VS3 1027 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 CACUL1Q86Y37 369 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ZNF366Q8N895 744 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 GANCQ8TET4 914 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 NELFBQ8WX92 580 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ZNF606Q8WXB4 792 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 KAT5Q92993 513 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 FAM149B1Q96BN6 582 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ST7Q9NRC1 585 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 STIM2Q9P246 746 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 FTSJ1Q9UET6 329 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 MAN1B1Q9UKM7 699 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 NAALADL1Q9UQQ1 740 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 DMTF1Q9Y222 760 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 WDFY3Q8IZQ1 3526 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 MUC22E2RYF6 1773 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 A0A087WV48 116 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 A0A1B0GVM2 712 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 A0A1W2PP55 124 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 A0A1W2PR77 199 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 TCAF2A6NFQ2 919 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 TTC34A8MYJ7 566 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 F5H5T6 163 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 MID1O15344 667 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ZRANB2O95218 330 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 TRUB2O95900 331 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ABCB4P21439 1286 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 CCR1P32246 355 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 CDK17Q00537 523 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 CCDC15Q0P6D6 951 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ACAP1Q15027 740 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 C5orf22Q49AR2 442 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ZC3H12AQ5D1E8 599 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SYPL2Q5VXT5 272 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 NCEH1Q6PIU2 408 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 MMAAQ8IVH4 418 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ARHGEF19Q8IW93 802 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 DHX40Q8IX18 779 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 LGI2Q8N0V4 545 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 MFSD2AQ8NA29 543 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SAP25Q8TEE9 199 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 KREMEN1Q96MU8 473 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SPAG5Q96R06 1193 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 PRMT1Q99873 361 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 RRN3Q9NYV6 651 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SLCO3A1Q9UIG8 710 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 RALYQ9UKM9 306 aaKnown RBP9.42□□□□□ -0.9
HDAC3-212ENST00000492407 PCDHGC3Q9UN70 934 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 BTBD3Q9Y2F9 522 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 SLCO1B1Q9Y6L6 691 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ADAMTS9Q9P2N4 1935 aa9.42□□□□□ -0.9
HDAC3-212ENST00000492407 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 GTPBP10A4D1E9 387 aaKnown RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 TRABD2BA6NFA1 517 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 E5RJQ4 531 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 TLR4O00206 839 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 PIK3R2O00459 728 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ATP9BO43861 1147 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 HSF2BPO75031 334 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ITGAVP06756 1048 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 KRT5P13647 590 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 BMP6P22004 513 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 MZF1P28698 734 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 GNA15P30679 374 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 HNF1BP35680 557 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ADPRHP54922 357 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 NXPH1P58417 271 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 PAK1Q13153 545 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 KCNJ12Q14500 433 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 KCNT1Q5JUK3 1230 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 RAP1GAP2Q684P5 730 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 NAPEPLDQ6IQ20 393 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 NEK5Q6P3R8 708 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 DENND1BQ6P3S1 775 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 PRPF39Q86UA1 669 aaKnown RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 TRIM69Q86WT6 500 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 CHSY1Q86X52 802 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ZDHHC17Q8IUH5 632 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 CCAR2Q8N163 923 aaKnown RBP9.41□□□□□ -0.9
HDAC3-212ENST00000492407 CFAP52Q8N1V2 620 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 AADATQ8N5Z0 425 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 FRS2Q8WU20 508 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms