RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 GRK6P43250 576 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 CCR5P51681 352 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 C21orf59P57076 290 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 KRT83P78385 493 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 SLC6A3Q01959 620 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 CST6Q15828 149 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 BRMS1LQ5PSV4 323 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 C9orf64Q5T6V5 341 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 SYPL2Q5VXT5 272 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 RAP1GAP2Q684P5 730 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 SLC26A9Q7LBE3 791 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
NUP50-217ENST00000491860 OXR1Q8N573 874 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 ZNF366Q8N895 744 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 RHBDD1Q8TEB9 315 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 SETD7Q8WTS6 366 aaKnown RBP9.03□□□□□ -0.96
NUP50-217ENST00000491860 COL26A1Q96A83 441 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 BIRC7Q96CA5 298 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 MYO19Q96H55 970 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 MRGPRX3Q96LB0 322 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 RPRD1AQ96P16 312 aaPredicted RBP9.03□□□□□ -0.96
NUP50-217ENST00000491860 SPAG5Q96R06 1193 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 CRACR2AQ9BSW2 395 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 TM9SF3Q9HD45 589 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 ANKRD6Q9Y2G4 727 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 DAAM1Q9Y4D1 1078 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 FARP1Q9Y4F1 1045 aaPredicted RBP9.03□□□□□ -0.96
NUP50-217ENST00000491860 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
NUP50-217ENST00000491860 SMG1Q96Q15 3661 aaKnown RBP9.02□□□□□ -0.96
NUP50-217ENST00000491860 NYNRINQ9P2P1 1898 aaKnown RBP9.02□□□□□ -0.96
NUP50-217ENST00000491860 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 A0A1B0GVT2 93 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 BECN2A8MW95 431 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 C1QTNF3-AMACRE9PGA6 284 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 VILLO15195 856 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 DAB1O75553 588 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 RNASEH2AO75792 299 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 EEF1GP26641 437 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 SLC8A1P32418 973 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 CSNK1EP49674 416 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 CDH4P55283 916 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 OVGP1Q12889 678 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 ZNF177Q13360 481 aaPredicted RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 CAMK4Q16566 473 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 VWA3BQ502W6 1294 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 SOWAHCQ53LP3 525 aaPredicted RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 FSCBQ5H9T9 825 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 OR6B2Q6IFH4 312 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 OLFML1Q6UWY5 402 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 LRRC31Q6UY01 552 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 MMAAQ8IVH4 418 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 DHX40Q8IX18 779 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 FAM71AQ8IYT1 594 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 DEFB106AQ8N104 65 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 CFAP52Q8N1V2 620 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 GALNT15Q8N3T1 639 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 OR8D1Q8WZ84 308 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 PGAP3Q96FM1 320 aaPredicted RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 CPXM1Q96SM3 734 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 PRMT1Q99873 361 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 NDST4Q9H3R1 872 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 CYTH4Q9UIA0 394 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 INTS6Q9UL03 887 aaKnown RBP9.02□□□□□ -0.97
NUP50-217ENST00000491860 DMTF1Q9Y222 760 aa9.02□□□□□ -0.97
NUP50-217ENST00000491860 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 CXorf51AA0A1B0GTR3 108 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 A0A1W2PP55 124 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 E9PAM4 449 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 MID1O15344 667 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 TNFSF14O43557 240 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 ATP9BO43861 1147 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 RNGTTO60942 597 aaKnown RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 CALCAP01258 141 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 IL1BP01584 269 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 PDGFRAP16234 1089 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 MZF1P28698 734 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 CD38P28907 300 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 CDH5P33151 784 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 CTSKP43235 329 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 GABRB2P47870 512 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 ARRB1P49407 418 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 GALCP54803 685 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 AUHQ13825 339 aaKnown RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 KIF19Q2TAC6 998 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 C5orf22Q49AR2 442 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 NCEH1Q6PIU2 408 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 FAM183BPQ6ZVS7 135 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 ARCQ7LC44 396 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 SETD3Q86TU7 594 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 PRPF39Q86UA1 669 aaKnown RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 IQCHQ86VS3 1027 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 ZNF677Q86XU0 584 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms