RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 NUCKS1Q9H1E3 243 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 ABCB8Q9NUT2 735 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 TMEM51Q9NW97 253 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ELOVL2Q9NXB9 296 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CACNA2D2Q9NY47 1150 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 IFNKQ9P0W0 207 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 STOML2Q9UJZ1 356 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 GMEB2Q9UKD1 530 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CLEC4EQ9ULY5 219 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 MYO6Q9UM54 1294 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 INVSQ9Y283 1065 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 SLC27A6Q9Y2P4 619 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 STARD13Q9Y3M8 1113 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 KCNMB2Q9Y691 235 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 STON1Q9Y6Q2 735 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ZFHX2Q9C0A1 2572 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 PRR23AA6NEV1 266 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 WASH3PC4AMC7 463 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 NPC1O15118 1278 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 LILRB5O75023 590 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 RHOBTB1O94844 696 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 TPM1P09493 284 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 PABPC1P11940 636 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 TDGF1P13385 188 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 TACR2P21452 398 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 HOXD9P28356 352 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 HOXC13P31276 330 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SDC4P31431 198 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SLC6A4P31645 630 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 RDXP35241 583 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 NNMTP40261 264 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 GABRB2P47870 512 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 OXCT1P55809 520 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ATP11AP98196 1134 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ZNF177Q13360 481 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 BYSLQ13895 437 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 EIF4HQ15056 248 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 ELF2Q15723 593 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 CLEC16AQ2KHT3 1053 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ARL13BQ3SXY8 428 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SLC25A52Q3SY17 297 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 FNDC3BQ53EP0 1204 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 FAM133BQ5BKY9 247 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 MS4A13Q5J8X5 152 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 BRMS1LQ5PSV4 323 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 RNF219Q5W0B1 726 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 NADSYN1Q6IA69 706 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ACAD10Q6JQN1 1059 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 PPP1R2P3Q6NXS1 205 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 DNAJC24Q6P3W2 148 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 DCUN1D2Q6PH85 259 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 XKR5Q6UX68 686 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 KIAA1324Q6UXG2 1013 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 SERPINA13PQ6UXR4 307 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 IRF2BP2Q7Z5L9 587 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 VPS36Q86VN1 386 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 FAM217AQ8IXS0 508 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 AHI1Q8N157 1196 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 EMC1Q8N766 993 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 RXFP2Q8WXD0 754 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SORCS1Q8WY21 1168 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 NELL1Q92832 810 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SPACA7Q96KW9 195 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 RPRD1AQ96P16 312 aaPredicted RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 PPP1R9BQ96SB3 815 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 PCDHB18PQ96TA0 734 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 ACOX2Q99424 681 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 TBCBQ99426 244 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 NPY6RQ99463 290 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 TPSD1Q9BZJ3 242 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 EDEM3Q9BZQ6 932 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 TKTL2Q9H0I9 626 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 XPO7Q9UIA9 1087 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 SMG5Q9UPR3 1016 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
SDHB-208ENST00000491274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.88□□□□□ -1.319e-14■□□□□ 8
SDHB-208ENST00000491274 CACNA1HO95180 2353 aa6.88□□□□□ -1.31
SDHB-208ENST00000491274 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 GFRA2O00451 464 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 DCLK1O15075 740 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 SRGAP2O75044 1071 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 ADAM23O75077 832 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 PAGE1O75459 146 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 LUC7L3O95232 432 aaKnown RBP6.87□□□□□ -1.31
SDHB-208ENST00000491274 IGLV3-25P01717 112 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 EPHX1P07099 455 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 SKILP12757 684 aa6.87□□□□□ -1.31
SDHB-208ENST00000491274 UNGP13051 313 aaPredicted RBP6.87□□□□□ -1.31
SDHB-208ENST00000491274 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms