RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 ELAVL3Q14576 367 aaKnown RBP16.17■□□□□ 0.18
NUP58-213ENST00000490231 SMAD1Q15797 465 aaKnown RBP16.17■□□□□ 0.18
NUP58-213ENST00000490231 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
NUP58-213ENST00000490231 STK40Q8N2I9 435 aa16.17■□□□□ 0.18
NUP58-213ENST00000490231 RPL10LQ96L21 214 aaKnown RBP16.17■□□□□ 0.18
NUP58-213ENST00000490231 SLC2A13Q96QE2 648 aa16.17■□□□□ 0.18
NUP58-213ENST00000490231 ASNSD1Q9NWL6 643 aa16.17■□□□□ 0.18
NUP58-213ENST00000490231 FTSJ1Q9UET6 329 aa16.17■□□□□ 0.18
NUP58-213ENST00000490231 A0A1B0GVM2 712 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 A0A1W2PR77 199 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 TCAF2A6NFQ2 919 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 WNT1P04628 370 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
NUP58-213ENST00000490231 CCR1P32246 355 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 STK19P49842 368 aaPredicted RBP16.16■□□□□ 0.18
NUP58-213ENST00000490231 CDK17Q00537 523 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 IL9RQ01113 521 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 TAF5Q15542 800 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 RABGAP1LQ5R372 815 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 TRIM65Q6PJ69 517 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 OR14C36Q8NHC7 312 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 FRS2Q8WU20 508 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 SPAG5Q96R06 1193 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 FAM204AQ9H8W3 233 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 ACP6Q9NPH0 428 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 AASDHPPTQ9NRN7 309 aa16.16■□□□□ 0.18
NUP58-213ENST00000490231 BECN2A8MW95 431 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 YKT6O15498 198 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 LATO43561 262 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 IL1BP01584 269 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 PDGFRAP16234 1089 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 CAMK2BQ13554 666 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 EFHC1Q5JVL4 640 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 CXorf57Q6NSI4 855 aaKnown RBP16.15■□□□□ 0.18
NUP58-213ENST00000490231 CIR1Q86X95 450 aaPredicted RBP16.15■□□□□ 0.18
NUP58-213ENST00000490231 DEFB106AQ8N104 65 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 WDTC1Q8N5D0 677 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 KDM4CQ9H3R0 1056 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 GDF3Q9NR23 364 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 DDIT4Q9NX09 232 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 APEX2Q9UBZ4 518 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 PCDHGA1Q9Y5H4 931 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 NUMA1Q14980 2115 aa16.15■□□□□ 0.18
NUP58-213ENST00000490231 PLXNB3Q9ULL4 1909 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 E9PAM4 449 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SLC7A4O43246 635 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 HSF2BPO75031 334 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 DRD3P35462 400 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SHBQ15464 509 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SLC45A4Q5BKX6 768 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 FBXL22Q6P050 247 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 GJB7Q6PEY0 223 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 DSG4Q86SJ6 1040 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 GATAD2AQ86YP4 633 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SAP25Q8TEE9 199 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SHC3Q92529 594 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 RNF34Q969K3 372 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 SERAC1Q96JX3 654 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 PPP1R13BQ96KQ4 1090 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 RPRD1AQ96P16 312 aaPredicted RBP16.14■□□□□ 0.17
NUP58-213ENST00000490231 CPXM1Q96SM3 734 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 CRACR2AQ9BSW2 395 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 RWDD2AQ9UIY3 292 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 RAXQ9Y2V3 346 aa16.14■□□□□ 0.17
NUP58-213ENST00000490231 DSPP15924 2871 aaKnown RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 LAMA5O15230 3695 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3DA0A087WVF3 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3IA0A087WXS9 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3EA0A087X179 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3KA0A087X1G2 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3FA6NER0 549 aaPredicted RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 TRABD2BA6NFA1 517 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3LB9A6J9 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TLR4O00206 839 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 WNT9AO14904 365 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 ATP9BO43861 1147 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 ITGAVP06756 1048 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3HP0C7X1 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 CDK4P11802 303 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 VAV1P15498 845 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 SLC9A1P19634 815 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 EPHA8P29322 1005 aaPredicted RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 NUDT1P36639 197 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 USP8P40818 1118 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 ARRB1P49407 418 aaPredicted RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 NXPH1P58417 271 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 AUHQ13825 339 aaKnown RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
NUP58-213ENST00000490231 ARHGAP44Q17R89 818 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 EXOC3L4Q17RC7 722 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 PRAMEF14Q5SWL7 426 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 FAM46CQ5VWP2 391 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3GQ6DHY5 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 TBC1D3CQ6IPX1 549 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 NAPEPLDQ6IQ20 393 aa16.13■□□□□ 0.17
NUP58-213ENST00000490231 C19orf48Q6RUI8 117 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms