RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	KRIT1	O00522	736 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	HR	O43593	1189 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	TJP3	O95049	919 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	APOE	P02649	317 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	KRT10	P13645	584 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	HCAR3	P49019	387 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	LMNB2	Q03252	620 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	RUNX3	Q13761	415 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	SIX1	Q15475	284 aa	Predicted RBP	18.72	■□□□□ 0.59
SRM-206	ENST00000490101	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.72	■□□□□ 0.59
SRM-206	ENST00000490101	BBS12	Q6ZW61	710 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	LONP2	Q86WA8	852 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	PYROXD2	Q8N2H3	581 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	ATP6V0D2	Q8N8Y2	350 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	RIN3	Q8TB24	985 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	RNF157	Q96PX1	679 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	FAM83C	Q9BQN1	747 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	KLF16	Q9BXK1	252 aa	Predicted RBP	18.72	■□□□□ 0.59
SRM-206	ENST00000490101	HEMGN	Q9BXL5	484 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	RNF38	Q9H0F5	515 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	SLC12A6	Q9UHW9	1150 aa		18.72	■□□□□ 0.59
SRM-206	ENST00000490101	CDV3	Q9UKY7	258 aa	Known RBP	18.72	■□□□□ 0.59
SRM-206	ENST00000490101	OTOL1	A6NHN0	477 aa	Predicted RBP	18.71	■□□□□ 0.59
SRM-206	ENST00000490101		H3BRJ5	948 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	CCDC188	H7C350	402 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	PAGE1	O75459	146 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	ARSA	P15289	507 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	ARL4A	P40617	200 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	NRG1	Q02297	640 aa	Predicted RBP	18.71	■□□□□ 0.59
SRM-206	ENST00000490101	MMRN1	Q13201	1228 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	TFDP2	Q14188	446 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.71	■□□□□ 0.59
SRM-206	ENST00000490101	NUGGC	Q68CJ6	796 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	PKN3	Q6P5Z2	889 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	UNC45B	Q8IWX7	931 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	PLD4	Q96BZ4	506 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	BTN2A3P	Q96KV6	586 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	C1orf74	Q96LT6	269 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	KIF9	Q9HAQ2	790 aa		18.71	■□□□□ 0.59
SRM-206	ENST00000490101	CWC15	Q9P013	229 aa	Known RBP	18.71	■□□□□ 0.59
SRM-206	ENST00000490101	PRR5-ARHGAP8	B1AHC4	643 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	PAPSS2	O95340	614 aa	Predicted RBP	18.7	■□□□□ 0.58
SRM-206	ENST00000490101	CKM	P06732	381 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	RET	P07949	1114 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	HDC	P19113	662 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	TGM1	P22735	817 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	HTR7	P34969	479 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	PXN	P49023	591 aa	Predicted RBP	18.7	■□□□□ 0.58
SRM-206	ENST00000490101	TUBB4B	P68371	445 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	SLC7A9	P82251	487 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	ARHGAP8	P85298	464 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	ADCY2	Q08462	1091 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
SRM-206	ENST00000490101	LLGL1	Q15334	1064 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	ANKRD20A8P	Q5CZ79	823 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	KAZN	Q674X7	775 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	CEP68	Q76N32	757 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	RFX6	Q8HWS3	928 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	SYNPO	Q8N3V7	929 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	LRRN4CL	Q8ND94	238 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	PCDH19	Q8TAB3	1148 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	AZIN2	Q96A70	460 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	CSPG4P5	Q96PW8	444 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	CYP2S1	Q96SQ9	504 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	AP1M1	Q9BXS5	423 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	MAK16	Q9BXY0	300 aa	Known RBP	18.7	■□□□□ 0.58
SRM-206	ENST00000490101	OR12D3	Q9UGF7	316 aa		18.7	■□□□□ 0.58
SRM-206	ENST00000490101	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.7	■□□□□ 0.58
SRM-206	ENST00000490101	TRAV19	A0A0A6YYK7	116 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	GOLGA6L10	A0A0M3HER8	536 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	FAM72C	H0Y354	149 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	CST8	O60676	142 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	STC2	O76061	302 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	HMBS	P08397	361 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	MBL2	P11226	248 aa	Predicted RBP	18.69	■□□□□ 0.58
SRM-206	ENST00000490101	SDHB	P21912	280 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	CYP1B1	Q16678	543 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	FAM72A	Q5TYM5	149 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	MANEAL	Q5VSG8	457 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	SLC9A4	Q6AI14	798 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	FAM72D	Q6L9T8	149 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	FSTL4	Q6MZW2	842 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	ADAT2	Q7Z6V5	191 aa	Known RBP	18.69	■□□□□ 0.58
SRM-206	ENST00000490101	FAM72B	Q86X60	149 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	MMGT1	Q8N4V1	131 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	PQLC3	Q8N755	202 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.69	■□□□□ 0.58
SRM-206	ENST00000490101	PRELID2	Q8N945	189 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	ZFR	Q96KR1	1074 aa	Known RBP	18.69	■□□□□ 0.58
SRM-206	ENST00000490101	SLC22A12	Q96S37	553 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	EPAS1	Q99814	870 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	HOMER3	Q9NSC5	361 aa		18.69	■□□□□ 0.58
SRM-206	ENST00000490101	EFCAB8	A8MWE9	144 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	EEF2K	O00418	725 aa	Known RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	MOCS2	O96007	188 aa	Predicted RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	ZFX	P17010	805 aa	Predicted RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	GOT1	P17174	413 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	CNR2	P34972	360 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	HARS2	P49590	506 aa	Known RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	C2orf54	Q08AI8	447 aa		18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms