RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LTBQ06643 244 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 SF3A3Q12874 501 aaKnown RBP eCLIP4.21□□□□□ -1.748e-8■□□□□ 9.9
HMGN1-218ENST00000490032 SLC4A8Q2Y0W8 1093 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 ALG10Q5BKT4 473 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 ALG10BQ5I7T1 473 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 ZNF569Q5MCW4 686 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 ZNF324BQ6AW86 544 aaPredicted RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TBC1D3GQ6DHY5 549 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TBC1D3CQ6IPX1 549 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 SPATA2LQ8IUW3 424 aaPredicted RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 SYTL1Q8IYJ3 562 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TBC1D3Q8IZP1 549 aaPredicted RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 KDM1BQ8NB78 822 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 CLEC18CQ8NCF0 446 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 CLEC4CQ8WTT0 213 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TMEM41AQ96HV5 264 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 FAM84BQ96KN1 310 aaPredicted RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TNIP3Q96KP6 325 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 MAGEH1Q9H213 219 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 KRCC1Q9NPI7 259 aaPredicted RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 CD93Q9NPY3 652 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 HIF1ANQ9NWT6 349 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 WNT16Q9UBV4 365 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 FBXO4Q9UKT5 387 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 PROCRQ9UNN8 238 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 CNTN6Q9UQ52 1028 aa4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TCF20Q9UGU0 1960 aaKnown RBP4.21□□□□□ -1.74
HMGN1-218ENST00000490032 TRBV5-7A0A0A0MS05 114 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 GOLGA6L3A6NEY3 463 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 KRT18P05783 430 aaKnown RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 HOXC6P09630 235 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 ARSBP15848 533 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 CHRNA5P30532 468 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 SLC16A2P36021 539 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 NEK3P51956 506 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 ASIC2Q16515 512 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 VWA5B1Q5TIE3 1220 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 SLC16A12Q6ZSM3 486 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 TRILQ7L0X0 811 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 CTU1Q7Z7A3 348 aaKnown RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 SRLQ86TD4 932 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 RBM23Q86U06 439 aaKnown RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 KLBQ86Z14 1044 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 DCP1BQ8IZD4 617 aaKnown RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 GABPB2Q8TAK5 448 aaPredicted RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 FAM71BQ8TC56 605 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 ELP5Q8TE02 316 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 NEUROG1Q92886 237 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 PHF21BQ96EK2 531 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 CCDC136Q96JN2 1154 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 SORBS1Q9BX66 1292 aaKnown RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 TMEM120AQ9BXJ8 343 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 PCGF6Q9BYE7 350 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 FRMD8Q9BZ67 464 aaPredicted RBP4.2□□□□□ -1.74
HMGN1-218ENST00000490032 ZNF304Q9HCX3 659 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 PKP3Q9Y446 797 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 INSL5Q9Y5Q6 135 aa4.2□□□□□ -1.74
HMGN1-218ENST00000490032 AQP12BA6NM10 295 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 SPRY3O43610 288 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 LCATP04180 440 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 CPA1P15085 419 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 PPM1AP35813 382 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 TECP42680 631 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 POLE2P56282 527 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 SELENOVP59797 346 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 ZBTB16Q05516 673 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 Q0VFX4 171 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 KEAP1Q14145 624 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 PTK2BQ14289 1009 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 BTBD16Q32M84 506 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 HSP90AB2PQ58FF8 381 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 ARL13AQ5H913 290 aaPredicted RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 AAGABQ6PD74 315 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 FAM186BQ8IYM0 893 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 FAM185AQ8N0U4 392 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 ENDOVQ8N8Q3 282 aaKnown RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 ENGASEQ8NFI3 743 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 FAM110DQ8TAY7 271 aaPredicted RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 STYXQ8WUJ0 223 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 EID2BQ96D98 161 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 ZNF419Q96HQ0 510 aaPredicted RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 MED30Q96HR3 178 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 WDR77Q9BQA1 342 aaPredicted RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 DCLK3Q9C098 648 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 MYO6Q9UM54 1294 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 MAGED2Q9UNF1 606 aaPredicted RBP4.19□□□□□ -1.74
HMGN1-218ENST00000490032 LZTS1Q9Y250 596 aa4.19□□□□□ -1.74
HMGN1-218ENST00000490032 OR6C75A6NL08 312 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 BECN2A8MW95 431 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 INAFM1C9JVW0 142 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 RGS14O43566 566 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 CYP1A2P05177 515 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 TRAF1Q13077 416 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 GPS2Q13227 327 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 SPARCL1Q14515 664 aa4.18□□□□□ -1.74
HMGN1-218ENST00000490032 STARD3Q14849 445 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms