RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 GOLGA6L7A0A1B0GV03 622 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 A0A1B0GVM2 712 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 TCAF2A6NFQ2 919 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 LEFTY2O00292 366 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 MAFKO60675 156 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 CNTN5O94779 1100 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 ADCY8P40145 1251 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-206ENST00000489131 WASHC5Q12768 1159 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 USP4Q13107 963 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
TOP3A-206ENST00000489131 TIGD7Q6NT04 549 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-206ENST00000489131 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 SETD3Q86TU7 594 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-206ENST00000489131 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 MAML1Q92585 1016 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 MYEOVQ96EZ4 313 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 KIF9Q9HAQ2 790 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 NDFIP2Q9NV92 336 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
TOP3A-206ENST00000489131 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
TOP3A-206ENST00000489131 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CXorf51AA0A1B0GTR3 108 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 RNF103O00237 685 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 RFXAPO00287 272 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CHADO15335 359 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CACNG3O60359 315 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 STK10O94804 968 aaKnown RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 PEX11BO96011 259 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 IFNB1P01574 187 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ETS1P14921 441 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 GJA1P17302 382 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ACTN2P35609 894 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CHKAP35790 457 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 AVPR1AP37288 418 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ITGA8P53708 1063 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 GPS1Q13098 491 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ADAM15Q13444 863 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 HLTFQ14527 1009 aaKnown RBP eCLIP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 TRIP13Q15645 432 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ZNF77Q15935 545 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ANKRD54Q6NXT1 300 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 HJURPQ8NCD3 748 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CPT1BQ92523 772 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 USP13Q92995 863 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 FMO2Q99518 471 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 IL12RB2Q99665 862 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 HINFPQ9BQA5 517 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 MAGEH1Q9H213 219 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 C10orf88Q9H8K7 445 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 TDP1Q9NUW8 608 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
TOP3A-206ENST00000489131 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 ZFP37Q9Y6Q3 630 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-206ENST00000489131 MYO7AQ13402 2215 aa13.15□□□□□ -0.31
TOP3A-206ENST00000489131 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 DOCK6Q96HP0 2047 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ARHGAP42A6NI28 874 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 RASA4BC9J798 803 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 MAP2K7O14733 419 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 MATN3O15232 486 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 RASA4O43374 803 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 RAMP2O60895 175 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 PPFIA2O75334 1257 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 FAM153BP0C7A2 387 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 CEBPBP17676 345 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 PTPN3P26045 913 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ETFBP38117 255 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 HSPA9P38646 679 aaKnown RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 IFNAR2P48551 515 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 PLTPP55058 493 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 NTHL1P78549 312 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 CDK16Q00536 496 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 AP1B1Q10567 949 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms