RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SERPING1P05155 500 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 MZF1P28698 734 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 OR1E1P30953 314 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ADRA1BP35368 520 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF143P52747 638 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 KRT83P78385 493 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 TSR1Q2NL82 804 aaKnown RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 SCYL2Q6P3W7 929 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 PRR23CQ6ZRP0 262 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 SETD3Q86TU7 594 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 CENPIQ92674 756 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 SYT11Q9BT88 431 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ZYG11BQ9C0D3 744 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 MKRN2Q9H000 416 aaKnown RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 SLC6A17Q9H1V8 727 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 PARD6AQ9NPB6 346 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ITM2CQ9NQX7 267 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 TAS2R14Q9NYV8 317 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 OR12D3Q9UGF7 316 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 MBD1Q9UIS9 605 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-218ENST00000489037 TBC1D30Q9Y2I9 924 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 SNX10Q9Y5X0 201 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF292O60281 2723 aa14.69□□□□□ -0.06
BRCA1-218ENST00000489037 MUC22E2RYF6 1773 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 EDDM13A0A1B0GTR0 161 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 BCLAF3A2AJT9 711 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 TARSL2A2RTX5 802 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 CNTN5O94779 1100 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF806P0C7X5 589 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 MYBL1P10243 752 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 CD6P30203 668 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 CTSOP43234 321 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 COPAP53621 1224 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 ZBTB16Q05516 673 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 TRIM14Q14142 442 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 HNRNPA1L2Q32P51 320 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 TTC31Q49AM3 519 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 AASDHQ4L235 1098 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 EFHC2Q5JST6 749 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 LYSMD4Q5XG99 296 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF776Q68DI1 518 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 CXorf57Q6NSI4 855 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 ARMCX6Q7L4S7 300 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 SLFN11Q7Z7L1 901 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 FRMD1Q8N878 549 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 RNF214Q8ND24 703 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 PIGKQ92643 395 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 RPL10LQ96L21 214 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 C2orf49Q9BVC5 232 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 OSBPL2Q9H1P3 480 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 RETREG1Q9H6L5 497 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 MRPL47Q9HD33 250 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 PRSS16Q9NQE7 514 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 TMPRSS4Q9NRS4 437 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 MPP6Q9NZW5 540 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 PPARGC1AQ9UBK2 798 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
BRCA1-218ENST00000489037 NCKAP1Q9Y2A7 1128 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 SCINQ9Y6U3 715 aa14.68□□□□□ -0.06
BRCA1-218ENST00000489037 IGLV3-10A0A075B6K4 115 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 TCRBV5S1A1TA0A578 114 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 DDX3XO00571 662 aaKnown RBP eCLIP14.67□□□□□ -0.061e-8■■■□□ 17.6
BRCA1-218ENST00000489037 CCP110O43303 1012 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 RNF8O76064 485 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ID4P47928 161 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 IRAK1P51617 712 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 AIF1P55008 147 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 HDAC4P56524 1084 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 NRG1Q02297 640 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 MAMLD1Q13495 774 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ARID5BQ14865 1188 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 CCDC6Q16204 474 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ACCSLQ4AC99 568 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ALFQ53S48 1182 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 PPP1R15BQ5SWA1 713 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 SYCP2LQ5T4T6 812 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 E4F1Q66K89 784 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 SPECC1LQ69YQ0 1117 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 PLEKHA7Q6IQ23 1121 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 RWDD4Q6NW29 188 aaKnown RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 TFAP2DQ7Z6R9 452 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 CACUL1Q86Y37 369 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 GANCQ8TET4 914 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 FOXJ1Q92949 421 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 NTAN1Q96AB6 310 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF653Q96CK0 615 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 MRGPRX3Q96LB0 322 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 ZNHIT6Q9NWK9 470 aaKnown RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 USP36Q9P275 1121 aaKnown RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 SLCO3A1Q9UIG8 710 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 CDV3Q9UKY7 258 aaKnown RBP14.67□□□□□ -0.06
BRCA1-218ENST00000489037 SCML1Q9UN30 329 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 SPTBN4Q9H254 2564 aa14.67□□□□□ -0.06
BRCA1-218ENST00000489037 TNRC6BQ9UPQ9 1833 aaKnown RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 NYNRINQ9P2P1 1898 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms