RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ARID5BQ14865 1188 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 WDR45BQ5MNZ6 344 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ARCQ7LC44 396 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 BNIPLQ7Z465 357 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 FAM131BQ86XD5 332 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF683Q8IZ20 524 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 CADM4Q8NFZ8 388 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 FUCA2Q9BTY2 467 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 CAPN10Q9HC96 672 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 SLCO3A1Q9UIG8 710 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 VPS28Q9UK41 221 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 SLC6A14Q9UN76 642 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 PCDH15Q96QU1 1955 aa18.27■□□□□ 0.52
ITGB1-215ENST00000488494 EDDM13A0A1B0GTR0 161 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 SYCE3A1L190 88 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 CDX4O14627 284 aaPredicted RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 TM4SF5O14894 197 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 CNTN5O94779 1100 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 SERPINF2P08697 491 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 C7P10643 843 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 MAOBP27338 520 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 CDH4P55283 916 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 PTP4A2Q12974 167 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 CDO1Q16878 200 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 KLHL40Q2TBA0 621 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 C5orf22Q49AR2 442 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 ALFQ53S48 1182 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 C9orf64Q5T6V5 341 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 JOSD2Q8TAC2 188 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 SNX19Q92543 992 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 GTPBP2Q9BX10 602 aaKnown RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 PABPC3Q9H361 631 aaKnown RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
ITGB1-215ENST00000488494 ADAM22Q9P0K1 906 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 SUSD2Q9UGT4 822 aa18.26■□□□□ 0.51
ITGB1-215ENST00000488494 E9PAM4 449 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
ITGB1-215ENST00000488494 VAV1P15498 845 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 SDC4P31431 198 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 ACSL1P33121 698 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 PSMD8P48556 350 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 PLK1P53350 603 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 SULT2A1Q06520 285 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 C15orf59Q2T9L4 293 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-215ENST00000488494 UAP1L1Q3KQV9 507 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 RAB6CQ53S08 254 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 DCAF12L1Q5VU92 463 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 DAB2IPQ5VWQ8 1189 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 LRRC31Q6UY01 552 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 TFAP2DQ7Z6R9 452 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 PHF13Q86YI8 300 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-215ENST00000488494 GANCQ8TET4 914 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 RXFP2Q8WXD0 754 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 AGPAT1Q99943 283 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 FEM1AQ9BSK4 669 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 RAB6CQ9H0N0 254 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 MUC3BQ9H195 1237 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 MIR1-1HGQ9H1L0 117 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 C6orf106Q9H6K1 298 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-215ENST00000488494 TMEM51Q9NW97 253 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 SLC25A13Q9UJS0 675 aa18.25■□□□□ 0.51
ITGB1-215ENST00000488494 C2CD4BA6NLJ0 364 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 MID1O15344 667 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 SEMA4FO95754 770 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 CALB1P05937 261 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 RHOCP08134 193 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 GNSP15586 552 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 FERP16591 822 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 ATXN3P54252 364 aaPredicted RBP18.24■□□□□ 0.51
ITGB1-215ENST00000488494 GSCP56915 257 aaPredicted RBP18.24■□□□□ 0.51
ITGB1-215ENST00000488494 CST6Q15828 149 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 CCDC14Q49A88 953 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 FILIP1LQ4L180 1135 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 SH3PXD2AQ5TCZ1 1133 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 MON1BQ7L1V2 547 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 MMAAQ8IVH4 418 aaKnown RBP18.24■□□□□ 0.51
ITGB1-215ENST00000488494 STK40Q8N2I9 435 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 DNASE2BQ8WZ79 361 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 BAP1Q92560 729 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 ALG14Q96F25 216 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 BTBD1Q9H0C5 482 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 PCED1AQ9H1Q7 454 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 MPP6Q9NZW5 540 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 SERGEFQ9UGK8 458 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 TBC1D30Q9Y2I9 924 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 OR51B4Q9Y5P0 310 aa18.24■□□□□ 0.51
ITGB1-215ENST00000488494 A0A1W2PP55 124 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 TARSL2A2RTX5 802 aaKnown RBP18.23■□□□□ 0.51
ITGB1-215ENST00000488494 METTL12A8MUP2 240 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 SRGAP2O75044 1071 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 KRT3P12035 628 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 NNMTP40261 264 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 ELAVL3Q14576 367 aaKnown RBP18.23■□□□□ 0.51
ITGB1-215ENST00000488494 IQCB1Q15051 598 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 ACBD5Q5T8D3 534 aaPredicted RBP18.23■□□□□ 0.51
ITGB1-215ENST00000488494 PSAPL1Q6NUJ1 521 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 LRSAM1Q6UWE0 723 aa18.23■□□□□ 0.51
ITGB1-215ENST00000488494 C3orf20Q8ND61 904 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms