RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SRGAP2O75044 1071 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 CLDN11O75508 207 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 TNFAIP3P21580 790 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 NNMTP40261 264 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 CDH4P55283 916 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 ASIC2Q16515 512 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 HNRNPA1L2Q32P51 320 aaKnown RBP24.41■■□□□ 1.5
RNF38-208ENST00000488058 RAB6CQ53S08 254 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 ALFQ53S48 1182 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 OR52K2Q8NGK3 314 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 FOXJ1Q92949 421 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 PPP1R9BQ96SB3 815 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 NUP58Q9BVL2 599 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 RAB6CQ9H0N0 254 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 MUC3BQ9H195 1237 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 VPS28Q9UK41 221 aa24.41■■□□□ 1.5
RNF38-208ENST00000488058 A0A1W2PQC6 194 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 C2CD4BA6NLJ0 364 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 E9PAM4 449 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 GOLGA6L19H0YKK7 550 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 RHOCP08134 193 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 MAOBP27338 520 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 LIMK1P53667 647 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 SULT2A1Q06520 285 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 CCDC14Q49A88 953 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 TTC31Q49AM3 519 aaPredicted RBP24.4■■□□□ 1.5
RNF38-208ENST00000488058 C5orf22Q49AR2 442 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 SYCP2LQ5T4T6 812 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 SH3PXD2AQ5TCZ1 1133 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 MON1BQ7L1V2 547 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 IRF2BP2Q7Z5L9 587 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 KDM1BQ8NB78 822 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 GANCQ8TET4 914 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 ZNF419Q96HQ0 510 aaPredicted RBP24.4■■□□□ 1.5
RNF38-208ENST00000488058 MPP6Q9NZW5 540 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 EVLQ9UI08 416 aaPredicted RBP24.4■■□□□ 1.5
RNF38-208ENST00000488058 SLC25A13Q9UJS0 675 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 MYO6Q9UM54 1294 aa24.4■■□□□ 1.5
RNF38-208ENST00000488058 EDDM13A0A1B0GTR0 161 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 RNASEH1O60930 286 aaKnown RBP24.39■■□□□ 1.49
RNF38-208ENST00000488058 GPD1P21695 349 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 PLK1P53350 603 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 FANCCQ00597 558 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 DUOXA1Q1HG43 343 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 ZSCAN23Q3MJ62 389 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 SFMBT2Q5VUG0 894 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 DNAJC24Q6P3W2 148 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 BNIPLQ7Z465 357 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 TFAP2DQ7Z6R9 452 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 C3orf20Q8ND61 904 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 C1orf74Q96LT6 269 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 HAPLN3Q96S86 360 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 FEM1AQ9BSK4 669 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 RSPH9Q9H1X1 276 aaPredicted RBP24.39■■□□□ 1.49
RNF38-208ENST00000488058 FSCN3Q9NQT6 498 aa24.39■■□□□ 1.49
RNF38-208ENST00000488058 ITIH6Q6UXX5 1313 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ADAMTS9Q9P2N4 1935 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 C4orf47A7E2U8 309 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 TMCO5BA8MYB1 307 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ENDOD1O94919 500 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 IGLV3-19P01714 112 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 RFC1P35251 1148 aaPredicted RBP24.38■■□□□ 1.49
RNF38-208ENST00000488058 HOXD12P35452 270 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 PTPN9P43378 593 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 MAPK8P45983 427 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 GSCP56915 257 aaPredicted RBP24.38■■□□□ 1.49
RNF38-208ENST00000488058 ZBTB16Q05516 673 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 C1QBPQ07021 282 aaKnown RBP24.38■■□□□ 1.49
RNF38-208ENST00000488058 NR1I3Q14994 352 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ARL13BQ3SXY8 428 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ACCSLQ4AC99 568 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 WDR45BQ5MNZ6 344 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 C9orf64Q5T6V5 341 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ACBD5Q5T8D3 534 aaPredicted RBP24.38■■□□□ 1.49
RNF38-208ENST00000488058 DCAF12L1Q5VU92 463 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 PEAR1Q5VY43 1037 aaPredicted RBP24.38■■□□□ 1.49
RNF38-208ENST00000488058 ACAD10Q6JQN1 1059 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 LRSAM1Q6UWE0 723 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ZNF683Q8IZ20 524 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 CEP76Q8TAP6 659 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 FAM172AQ8WUF8 416 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 ALG14Q96F25 216 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 MIR1-1HGQ9H1L0 117 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 TMEM9BQ9NQ34 198 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 TBC1D30Q9Y2I9 924 aa24.38■■□□□ 1.49
RNF38-208ENST00000488058 GON4LQ3T8J9 2241 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 TARSL2A2RTX5 802 aaKnown RBP24.37■■□□□ 1.49
RNF38-208ENST00000488058 ACSL1P33121 698 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 SLC23A3Q6PIS1 610 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 WDR59Q6PJI9 974 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 RABEPKQ7Z6M1 372 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 MMAAQ8IVH4 418 aaKnown RBP24.37■■□□□ 1.49
RNF38-208ENST00000488058 STK40Q8N2I9 435 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 SNX19Q92543 992 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 TAS2R14Q9NYV8 317 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 SLC6A14Q9UN76 642 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 NCKAP1Q9Y2A7 1128 aa24.37■■□□□ 1.49
RNF38-208ENST00000488058 MED19A0JLT2 244 aaPredicted RBP24.36■■□□□ 1.49
RNF38-208ENST00000488058 ANKRD62A6NC57 917 aa24.36■■□□□ 1.49
RNF38-208ENST00000488058 DRGXA6NNA5 263 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms