RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NDC80O14777 642 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 TIMM44O43615 452 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 PHF2O75151 1096 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 GAS8O95995 478 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 RHOCP08134 193 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 ADH5P11766 374 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 ACTN2P35609 894 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 EIF2DP41214 584 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 RPS24P62847 133 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 DYNLT1P63172 113 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 SULT2A1Q06520 285 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 GALNT2Q10471 571 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 POLD3Q15054 466 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 NOMO1Q15155 1222 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 ANO4Q32M45 955 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 GLE1Q53GS7 698 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 PARM1Q6UWI2 310 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 VITQ6UXI7 678 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 C4orf22Q6V702 233 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 SYDE1Q6ZW31 735 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 MFN1Q8IWA4 741 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 SLC35B2Q8TB61 432 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 ACTL9Q8TC94 416 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 TFB1MQ8WVM0 346 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 WBP2Q969T9 261 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 TSGA13Q96PP4 275 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 VAT1Q99536 393 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 C2orf49Q9BVC5 232 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 DTLQ9NZJ0 730 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 CDH22Q9UJ99 828 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 HEY1Q9Y5J3 304 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 SNX10Q9Y5X0 201 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 MYH10P35580 1976 aa11.33□□□□□ -0.6
HDLBP-242ENST00000488013 MTCL1Q9Y4B5 1905 aaKnown RBP11.33□□□□□ -0.6
HDLBP-242ENST00000488013 C2CD4DB7Z1M9 353 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 LIASO43766 372 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 CACNG3O60359 315 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 TSPAN3O60637 253 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ITGAVP06756 1048 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RBP3P10745 1247 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 TYRP14679 529 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 GLULP15104 373 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 GDI1P31150 447 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 GGCXP38435 758 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 PLK1P53350 603 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 OTUD4Q01804 1114 aaKnown RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 GNA12Q03113 381 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RUNX3Q13761 415 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ITPRIPL2Q3MIP1 535 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ALFQ53S48 1182 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 LY6G5CQ5SRR4 150 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RETSATQ6NUM9 610 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 AADACL2Q6P093 401 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 TMEM25Q86YD3 366 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 BBS5Q8N3I7 341 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 CARNMT1Q8N4J0 409 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 PRELID2Q8N945 189 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 CSGALNACT1Q8TDX6 532 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 WFIKKN2Q8TEU8 576 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ATXN2LQ8WWM7 1075 aaKnown RBP11.32□□□□□ -0.6
HDLBP-242ENST00000488013 CASKIN2Q8WXE0 1202 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 FGF14Q92915 247 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 SLCO2A1Q92959 643 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ACDQ96AP0 544 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 HDAC11Q96DB2 347 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ZNF599Q96NL3 588 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 OLFM3Q96PB7 478 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 LRRC3BQ96PB8 259 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 AP1M1Q9BXS5 423 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 MAGEB5Q9BZ81 275 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 LINC00597Q9H2U6 94 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 ZNF148Q9UQR1 794 aa11.32□□□□□ -0.6
HDLBP-242ENST00000488013 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms