RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PRKAA1Q13131 559 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 CATSPER1Q8NEC5 780 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 HAPLN2Q9GZV7 340 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 BRCC3P46736 316 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PRKAA2P54646 552 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 INCA1Q0VD86 236 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 IMPG1Q17R60 797 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PACS1Q6VY07 963 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PTAR1Q7Z6K3 402 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PDZD8Q8NEN9 1154 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TMEM169Q96HH4 297 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TBC1D10AQ9BXI6 508 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 SYBUQ9NX95 663 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CNTN6Q9UQ52 1028 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 IGKV6-21A0A0C4DH24 114 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 C2orf81A6NN90 581 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 DNM1LO00429 736 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 GCATO75600 419 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CCNB1P14635 433 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 NUMBP49757 651 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 OXCT1P55809 520 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TUSC3Q13454 348 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 MED21Q13503 144 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CRYMQ14894 314 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CA9Q16790 459 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PCID2Q5JVF3 399 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 FAM117BQ6P1L5 589 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 LRRC8BQ6P9F7 803 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TSC22D3Q99576 134 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ANKRD6Q9Y2G4 727 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
TRA2B-214ENST00000487615 DPYSL4O14531 572 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
TRA2B-214ENST00000487615 SERPINF2P08697 491 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CRABP2P29373 138 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 OR1E1P30953 314 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 STX5Q13190 355 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 BIRC5O15392 142 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CABYRO75952 493 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ASMTLO95671 621 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CYBBP04839 570 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 NNMTP40261 264 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 DPYSL2Q16555 572 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 ZRANB3Q5FWF4 1079 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PYROXD2Q8N2H3 581 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 EFCAB1Q9HAE3 211 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 TRPM5Q9NZQ8 1165 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 SLC45A1Q9Y2W3 748 aa12.05□□□□□ -0.48
TRA2B-214ENST00000487615 PHGDHO43175 533 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 GLP2RO95838 553 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ESRRGP62508 458 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 MRPS35P82673 323 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 FLOT2Q14254 428 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 CNGA3Q16281 694 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 CLEC4CQ8WTT0 213 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 MECRQ9BV79 373 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF180Q9UJW8 692 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 THSD7AQ9UPZ6 1657 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ZBBXA8MT70 800 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 PPEF2O14830 753 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 FAM155BO75949 473 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 STBD1O95210 358 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 CHRM3P20309 590 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 WARSP23381 471 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ATXN1P54253 815 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 CSE1LP55060 971 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 CRYBG2Q8N1P7 616 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 AGAP11Q8TF27 550 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF317Q96PQ6 595 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 TRIM54Q9BYV2 358 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 UNKQ9C0B0 810 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 DRC3Q9H069 523 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 VRTNQ9H8Y1 702 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 MARCH2Q9P0N8 246 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 PLLPQ9Y342 182 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 PKP3Q9Y446 797 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 RNF103-CHMP3A0A140T963 221 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 H0Y626 953 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 ACADSP16219 412 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 TCN1P20061 433 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 POLD3Q15054 466 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 SIX1Q15475 284 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms