RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 TJP2Q9UDY2 1190 aa16.72■□□□□ 0.27
SRRT-212ENST00000487311 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
SRRT-212ENST00000487311 CNTN6Q9UQ52 1028 aa16.72■□□□□ 0.27
SRRT-212ENST00000487311 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
SRRT-212ENST00000487311 COL5A1P20908 1838 aaPredicted RBP16.72■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TYW5A2RUC4 315 aaKnown RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TLX3O43711 291 aaPredicted RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 IL1BP01584 269 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 IGLV3-25P01717 112 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 PDGFRAP16234 1089 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 ABCB4P21439 1286 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 BMP6P22004 513 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 NXPH1P58417 271 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TARDBPQ13148 414 aaKnown RBP eCLIP16.71■□□□□ 0.27
SRRT-212ENST00000487311 INAVAQ3KP66 663 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TTI2Q6NXR4 508 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 SKA1Q96BD8 255 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 CCDC34Q96HJ3 373 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 DHTKD1Q96HY7 919 aaPredicted RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 CEP63Q96MT8 703 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 PRMT1Q99873 361 aaKnown RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 CAAP1Q9H8G2 361 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 GDF3Q9NR23 364 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
SRRT-212ENST00000487311 ARID1BQ8NFD5 2236 aaPredicted RBP16.71■□□□□ 0.27
SRRT-212ENST00000487311 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 E5RJQ4 531 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 CAPN9O14815 690 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 LATO43561 262 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 RTN2O75298 545 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 RFPL3O75679 317 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 SMC2O95347 1197 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 MOCS3O95396 460 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 TRUB2O95900 331 aaKnown RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 EPHA8P29322 1005 aaPredicted RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 MAT2AP31153 395 aaKnown RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 GCNT1Q02742 428 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 KCNH2Q12809 1159 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 SFSWAPQ12872 951 aaKnown RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 FBXL19Q6PCT2 694 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 TMEM110Q86TL2 294 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 CCDC117Q8IWD4 279 aaPredicted RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
SRRT-212ENST00000487311 PIP4K2CQ8TBX8 421 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 FAM131CQ96AQ9 280 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 ALG14Q96F25 216 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 BTN2A3PQ96KV6 586 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 RAI2Q9Y5P3 530 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 MYLKQ15746 1914 aa16.7■□□□□ 0.26
SRRT-212ENST00000487311 KCNU1A8MYU2 1149 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 E9PAM4 449 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 P4HA2O15460 535 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 ADH1BP00325 375 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 PRB1P04280 392 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 C1SP09871 688 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 ACADSBP45954 432 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 RXRGP48443 463 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 IRAK1P51617 712 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 YWHAZP63104 245 aaKnown RBP16.69■□□□□ 0.26
SRRT-212ENST00000487311 SEMG2Q02383 582 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 POM121L1PQ3SYA9 428 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 HES3Q5TGS1 186 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 SFMBT2Q5VUG0 894 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 RNF219Q5W0B1 726 aaPredicted RBP16.69■□□□□ 0.26
SRRT-212ENST00000487311 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 CXorf57Q6NSI4 855 aaKnown RBP16.69■□□□□ 0.26
SRRT-212ENST00000487311 MFSD2AQ8NA29 543 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 ZNF606Q8WXB4 792 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 ERVMER34-1Q9H9K5 563 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 CA5BQ9Y2D0 317 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 SHROOM3Q8TF72 1996 aa16.69■□□□□ 0.26
SRRT-212ENST00000487311 PSMA7O14818 248 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
SRRT-212ENST00000487311 APOEP02649 317 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 KRT5P13647 590 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 EIF2S3P41091 472 aaKnown RBP16.68■□□□□ 0.26
SRRT-212ENST00000487311 PLK1P53350 603 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 NUCB2P80303 420 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
SRRT-212ENST00000487311 FBXL22Q6P050 247 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 TRIM59Q8IWR1 403 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 WDTC1Q8N5D0 677 aa16.68■□□□□ 0.26
SRRT-212ENST00000487311 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms