RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 IL31Q6EBC2 164 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 MON1BQ7L1V2 547 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 TFAP2DQ7Z6R9 452 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 DNAAF5Q86Y56 855 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 RGL4Q8IZJ4 473 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 OR2I1PQ8NGU4 316 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 ALG14Q96F25 216 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 ZNF419Q96HQ0 510 aaPredicted RBP16.32■□□□□ 0.2
GABPA-203ENST00000487266 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 MPP6Q9NZW5 540 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 ADAM22Q9P0K1 906 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 EVLQ9UI08 416 aaPredicted RBP16.32■□□□□ 0.2
GABPA-203ENST00000487266 NCOR2Q9Y618 2525 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 SLCO1B1Q9Y6L6 691 aa16.32■□□□□ 0.2
GABPA-203ENST00000487266 CNOT1A5YKK6 2376 aaKnown RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 ASCC3Q8N3C0 2202 aaKnown RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 ITIH6Q6UXX5 1313 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 A0A1B0GTH6 734 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 C2CD4BA6NLJ0 364 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 CDX4O14627 284 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 ENGP17813 658 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 ZNF177Q13360 481 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 C5orf22Q49AR2 442 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 PPM1JQ5JR12 505 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 ZNF776Q68DI1 518 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 SLC23A3Q6PIS1 610 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 PHF13Q86YI8 300 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 MMAAQ8IVH4 418 aaKnown RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 FEM1AQ9BSK4 669 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 MAGEB5Q9BZ81 275 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 RSPH9Q9H1X1 276 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 C6orf106Q9H6K1 298 aaPredicted RBP16.31■□□□□ 0.2
GABPA-203ENST00000487266 OR51B4Q9Y5P0 310 aa16.31■□□□□ 0.2
GABPA-203ENST00000487266 E9PAM4 449 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 TM4SF5O14894 197 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 MID1O15344 667 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SNAP91O60641 907 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SRGAP2O75044 1071 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 CLDN11O75508 207 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 F9P00740 461 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 DNTTP04053 509 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SRPRAP08240 638 aaKnown RBP16.3■□□□□ 0.2
GABPA-203ENST00000487266 FERP16591 822 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SDC4P31431 198 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
GABPA-203ENST00000487266 PSMD8P48556 350 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 METAP1P53582 386 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 CDH4P55283 916 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 ARCQ7LC44 396 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 IRF2BP2Q7Z5L9 587 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 STK40Q8N2I9 435 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 ZCCHC9Q8N567 271 aaKnown RBP16.3■□□□□ 0.2
GABPA-203ENST00000487266 CCDC185Q8N715 623 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 PSMB7Q99436 277 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SYT11Q9BT88 431 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 NUSAP1Q9BXS6 441 aaKnown RBP16.3■□□□□ 0.2
GABPA-203ENST00000487266 MUC3BQ9H195 1237 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 MIR1-1HGQ9H1L0 117 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 CAPN10Q9HC96 672 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 TMEM9BQ9NQ34 198 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 VPS28Q9UK41 221 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 TBC1D30Q9Y2I9 924 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
GABPA-203ENST00000487266 TP53BP1Q12888 1972 aaPredicted RBP16.29■□□□□ 0.2
GABPA-203ENST00000487266 CACNA1EQ15878 2313 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 A0A0D9SEW6 157 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 EDDM13A0A1B0GTR0 161 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 TCRBV5S1A1TA0A578 114 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
GABPA-203ENST00000487266 SERPINC1P01008 464 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 RHOCP08134 193 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 C7P10643 843 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 KRT3P12035 628 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 GLDCP23378 1020 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 OXTRP30559 389 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 PLK1P53350 603 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 HDAC4P56524 1084 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
GABPA-203ENST00000487266 SLC12A1Q13621 1099 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 ASIC2Q16515 512 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 DUOXA1Q1HG43 343 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 UAP1L1Q3KQV9 507 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 ZSCAN23Q3MJ62 389 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 FILIP1LQ4L180 1135 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 C3orf20Q8ND61 904 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 FRS2Q8WU20 508 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 FAM172AQ8WUF8 416 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 SNX19Q92543 992 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 FOXJ1Q92949 421 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 MCEEQ96PE7 176 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 NUP58Q9BVL2 599 aa16.29■□□□□ 0.2
GABPA-203ENST00000487266 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms