RNA–Protein interactions for RNA: ENST00000486856.5

IFT80-222, Transcript of intraflagellar transport 80, human

TSL 4

Gene IFT80, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT80-222	ENST00000486856	LIN7C	Q9NUP9	197 aa	Known RBP	3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	TMLHE	Q9NVH6	421 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	ARL8B	Q9NVJ2	186 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	NDUFAF4	Q9P032	175 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	VPS4A	Q9UN37	437 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	CNTN6	Q9UQ52	1028 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	RIPOR2	Q9Y4F9	1068 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	EHBP1L1	Q8N3D4	1523 aa		3.8	□□□□□ -1.8
IFT80-222	ENST00000486856	PLEKHH2	Q8IVE3	1493 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	DCC	P43146	1447 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	AKAP12	Q02952	1782 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	ZNF644	Q9H582	1327 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	TOPAZ1	Q8N9V7	1692 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	MANSC4	A6NHS7	340 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	NKX2-8	O15522	239 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	USP12	O75317	370 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	PRKCG	P05129	697 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	GYS1	P13807	737 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	VEGFA	P15692	232 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	GRK5	P34947	590 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	HAL	P42357	657 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	MCM2	P49736	904 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	CDK7	P50613	346 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	TAS2R50	P59544	299 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	ZNF268	Q14587	947 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	PFKFB3	Q16875	520 aa	Predicted RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	TIGD6	Q17RP2	521 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	AAK1	Q2M2I8	961 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	PROSER3	Q2NL68	480 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	TTC22	Q5TAA0	569 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	CHSY1	Q86X52	802 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	GALNT15	Q8N3T1	639 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	SEMA6D	Q8NFY4	1073 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	THAP4	Q8WY91	577 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	C3orf49	Q96BT1	292 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	SENP7	Q9BQF6	1050 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	SORBS1	Q9BX66	1292 aa	Known RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	DAPP1	Q9UN19	280 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	SCAF8	Q9UPN6	1271 aa	Known RBP	3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	CUL9	Q8IWT3	2517 aa		3.79	□□□□□ -1.8
IFT80-222	ENST00000486856	PTPRU	Q92729	1446 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	ADGRL3	Q9HAR2	1447 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	KIAA1107	Q9UPP5	1409 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	ZNF804B	A4D1E1	1349 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3D	A0A087WVF3	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3I	A0A087WXS9	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3E	A0A087X179	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3K	A0A087X1G2	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TCRBV5S1A1T	A0A578	114 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3B	A6NDS4	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A18P	A6NE21	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3F	A6NER0	549 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A16P	A6NEW6	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	WIPF3	A6NGB9	483 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A9P	A6NNJ1	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	SLC38A8	A6NNN8	435 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A5P	A8MXJ8	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TISP43	B9A030	160 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3L	B9A6J9	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	MBP	P02686	304 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A15P	P0C7V4	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM90A14P	P0C7W9	464 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3H	P0C7X1	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	CERS1	P27544	350 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	CST5	P28325	142 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TACR3	P29371	465 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TKT	P29401	623 aa	Known RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	SERPINA4	P29622	427 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	VPS41	P49754	854 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	CCT4	P50991	539 aa	Known RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FOXG1	P55316	489 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	SLC14A1	Q13336	389 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	KPNB1	Q14974	876 aa	Known RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	INO80D	Q53TQ3	878 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3G	Q6DHY5	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	DGAT2L7P	Q6IED9	249 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3C	Q6IPX1	549 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	ANO7	Q6IWH7	933 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	C11orf87	Q6NUJ2	197 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	C16orf89	Q6UX73	402 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	RANBP10	Q6VN20	620 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TBC1D3	Q8IZP1	549 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	SRFBP1	Q8NEF9	429 aa	Known RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	OTUD7A	Q8TE49	926 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	PRR11	Q96HE9	360 aa	Predicted RBP	3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	TRAPPC9	Q96Q05	1148 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	FAM167B	Q9BTA0	163 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	SEMA4C	Q9C0C4	833 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	NUAK2	Q9H093	628 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	MLXIP	Q9HAP2	919 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	ASNSD1	Q9NWL6	643 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	BAG5	Q9UL15	447 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	ZBTB1	Q9Y2K1	713 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	COL24A1	Q17RW2	1714 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	NOS1	P29475	1434 aa		3.78	□□□□□ -1.8
IFT80-222	ENST00000486856	PARD3	Q8TEW0	1356 aa		3.77	□□□□□ -1.81
IFT80-222	ENST00000486856	PLEKHG1	Q9ULL1	1385 aa		3.77	□□□□□ -1.81
IFT80-222	ENST00000486856	NRXN3	Q9Y4C0	1643 aa		3.77	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms