RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 FNIP1Q8TF40 1166 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 MYO19Q96H55 970 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ZC3H10Q96K80 434 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 MRGPRX3Q96LB0 322 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ZYG11BQ9C0D3 744 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 MPP6Q9NZW5 540 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 PPARGC1AQ9UBK2 798 aaKnown RBP18.72■□□□□ 0.59
COL1A1-207ENST00000486572 ERVW-1Q9UQF0 538 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 INVSQ9Y283 1065 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 CKAP5Q14008 2032 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 OTOGLQ3ZCN5 2332 aa18.72■□□□□ 0.59
COL1A1-207ENST00000486572 USP34Q70CQ2 3546 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 RHOCP08134 193 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 EIF4A3P38919 411 aaKnown RBP18.71■□□□□ 0.59
COL1A1-207ENST00000486572 ZNF252P-AS1Q0IIN9 211 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 ELF2Q15723 593 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 MAP7D1Q3KQU3 841 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 PLK5Q496M5 336 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 EFHC2Q5JST6 749 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 CCDC122Q5T0U0 273 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 C6orf118Q5T5N4 469 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 KIAA1324Q6UXG2 1013 aaKnown RBP18.71■□□□□ 0.59
COL1A1-207ENST00000486572 GAS2L3Q86XJ1 694 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 RLN3Q8WXF3 142 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 ALG14Q96F25 216 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 FEM1AQ9BSK4 669 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 TRIM7Q9C029 511 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 MKRN2Q9H000 416 aaKnown RBP18.71■□□□□ 0.59
COL1A1-207ENST00000486572 THAP2Q9H0W7 228 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 MUC3BQ9H195 1237 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 SLC6A17Q9H1V8 727 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 PRDM16Q9HAZ2 1276 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 VPS28Q9UK41 221 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 OR51B4Q9Y5P0 310 aa18.71■□□□□ 0.59
COL1A1-207ENST00000486572 SSU72P8A0A1W2PR75 194 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF217O75362 1048 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 OR1E1P30953 314 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 NUMBP49757 651 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 COPAP53621 1224 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 ADKP55263 362 aaKnown RBP18.7■□□□□ 0.58
COL1A1-207ENST00000486572 TBX2Q13207 712 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-207ENST00000486572 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-207ENST00000486572 SLC18A3Q16572 532 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 RIF1Q5UIP0 2472 aaKnown RBP18.7■□□□□ 0.58
COL1A1-207ENST00000486572 OR2T3Q8NH03 318 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 TBC1D31Q96DN5 1066 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 DUSP15Q9H1R2 295 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-207ENST00000486572 DEF6Q9H4E7 631 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 FBRSQ9HAH7 460 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF212Q9UDV6 495 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 SUN2Q9UH99 717 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 FZD10Q9ULW2 581 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 NENFQ9UMX5 172 aa18.7■□□□□ 0.58
COL1A1-207ENST00000486572 PLXND1Q9Y4D7 1925 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 AKR1B15C9JRZ8 316 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 FAM72CH0Y354 149 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RNF8O76064 485 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RHOBTB1O94844 696 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 LRIG2O94898 1065 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RETP07949 1114 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 BCKDHBP21953 392 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 NNMTP40261 264 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 STK19P49842 368 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 GFPT1Q06210 699 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 HNRNPA1L2Q32P51 320 aaKnown RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 FAM72AQ5TYM5 149 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 FAM72DQ6L9T8 149 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RWDD4Q6NW29 188 aaKnown RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 METTL3Q86U44 580 aaKnown RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 FAM72BQ86X60 149 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 TMPRSS6Q8IU80 811 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 PRCCQ92733 491 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RPL10LQ96L21 214 aaKnown RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 C2orf49Q9BVC5 232 aaPredicted RBP18.69■□□□□ 0.58
COL1A1-207ENST00000486572 RETREG1Q9H6L5 497 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 PRSS16Q9NQE7 514 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 SLC25A13Q9UJS0 675 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 NEU3Q9UQ49 428 aa18.69■□□□□ 0.58
COL1A1-207ENST00000486572 DOCK4Q8N1I0 1966 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 FAM186AA6NE01 2351 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 GVINP1Q7Z2Y8 2422 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 CYP1A2P05177 515 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 RHOQP17081 205 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 L1CAMP32004 1257 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF75DP51815 510 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-207ENST00000486572 PMS2CLQ68D20 193 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF783Q6ZMS7 281 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 CACUL1Q86Y37 369 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 PYROXD2Q8N2H3 581 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 DCLK2Q8N568 766 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 FRMD1Q8N878 549 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 DCAF4L2Q8NA75 395 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 SIPA1Q96FS4 1042 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 MRFAP1L1Q96HT8 127 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 MAGEB5Q9BZ81 275 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 SLCO3A1Q9UIG8 710 aa18.68■□□□□ 0.58
COL1A1-207ENST00000486572 MBD1Q9UIS9 605 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-207ENST00000486572 CYP8B1Q9UNU6 501 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms