RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
PTPN7-213ENST00000486116 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.8
PTPN7-213ENST00000486116 PRAMEF33A0A0G2JMD5 474 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 MUSKO15146 869 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 NVLO15381 856 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 PRAMEF10O60809 474 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 SEMA7AO75326 666 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 GCNT3O95395 438 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 KRT7P08729 469 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 FAM200BP0CF97 657 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 PRLRP16471 622 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 ADORA2BP29275 332 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 CSKP41240 450 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 KIF11P52732 1056 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 MLLT10P55197 1068 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 SPIDRQ14159 915 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 ESPL1Q14674 2120 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 CAPRIN2Q6IMN6 1127 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 SYCP3Q8IZU3 236 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 C12orf29Q8N999 325 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 C9orf43Q8TAL5 461 aaPredicted RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 PLD4Q96BZ4 506 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 IFT43Q96FT9 208 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 CDK5RAP1Q96SZ6 601 aaKnown RBP10.02□□□□□ -0.81
PTPN7-213ENST00000486116 SYNDIG1Q9H7V2 258 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 FZD3Q9NPG1 666 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 FOXJ2Q9P0K8 574 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 MARCH2Q9P0N8 246 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 PISDQ9UG56 409 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 STOML2Q9UJZ1 356 aa10.02□□□□□ -0.81
PTPN7-213ENST00000486116 EDDM13A0A1B0GTR0 161 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 SLC26A4O43511 780 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 RNGTTO60942 597 aaKnown RBP10.01□□□□□ -0.81
PTPN7-213ENST00000486116 IL1BP01584 269 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 DLATP10515 647 aaKnown RBP10.01□□□□□ -0.81
PTPN7-213ENST00000486116 ITIH1P19827 911 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 GNLYP22749 145 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 IRX6P78412 446 aaPredicted RBP10.01□□□□□ -0.81
PTPN7-213ENST00000486116 NR0B2Q15466 257 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 BMT2Q1RMZ1 405 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 DEFB133Q30KQ1 61 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 AGBL4Q5VU57 503 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 C1QL3Q5VWW1 255 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 GCNT7Q6ZNI0 430 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 DSG4Q86SJ6 1040 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 KDM1BQ8NB78 822 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 WDR48Q8TAF3 677 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
PTPN7-213ENST00000486116 ZNF516Q92618 1163 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 KLK6Q92876 244 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 PTPRN2Q92932 1015 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 CALML4Q96GE6 196 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 CGRRF1Q99675 332 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 FOXP3Q9BZS1 431 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 PNPLA8Q9NP80 782 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 DNAJC28Q9NX36 388 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 SALL4Q9UJQ4 1053 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 ERVW-1Q9UQF0 538 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 USP3Q9Y6I4 520 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 MED13LQ71F56 2210 aa10.01□□□□□ -0.81
PTPN7-213ENST00000486116 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 SLC31A1O15431 190 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 SLC7A4O43246 635 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 CLDN1O95832 211 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 ASLP04424 464 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 PRKCGP05129 697 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 VAV1P15498 845 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 TNNI1P19237 187 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 ATICP31939 592 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 ETV5P41161 510 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 CLDN2P57739 230 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 ZNF445P59923 1031 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 HNRNPKP61978 463 aaKnown RBP eCLIP10□□□□□ -0.81
PTPN7-213ENST00000486116 MAMDC2Q7Z304 686 aaPredicted RBP10□□□□□ -0.81
PTPN7-213ENST00000486116 ABI3BPQ7Z7G0 1075 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 SLC35F3Q8IY50 421 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 CRYBG2Q8N1P7 616 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 BOCQ9BWV1 1114 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 VRTNQ9H8Y1 702 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 PREBQ9HCU5 417 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 GPR27Q9NS67 375 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 SLCO3A1Q9UIG8 710 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 KLF15Q9UIH9 416 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 SARDHQ9UL12 918 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 STRIP2Q9ULQ0 834 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 CSNK1G3Q9Y6M4 447 aa10□□□□□ -0.81
PTPN7-213ENST00000486116 WIPF3A6NGB9 483 aa9.99□□□□□ -0.81
PTPN7-213ENST00000486116 C9orf172C9J069 976 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms