RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 HECTD2Q5U5R9 776 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ITPRIPL1Q6GPH6 555 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 GJB7Q6PEY0 223 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 FASTKD5Q7L8L6 764 aaKnown RBP4.45□□□□□ -1.7
FN1-222ENST00000485567 TMEM200AQ86VY9 491 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 CHD1LQ86WJ1 897 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ANKRD52Q8NB46 1076 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 CAGE1Q8TC20 777 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 SNRNP27Q8WVK2 155 aaKnown RBP4.45□□□□□ -1.7
FN1-222ENST00000485567 RUFY2Q8WXA3 655 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
FN1-222ENST00000485567 REPS1Q96D71 796 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ELP4Q96EB1 424 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 C5orf34Q96MH7 638 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 PRRX2Q99811 253 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 MACROD1Q9BQ69 325 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 CLSTN3Q9BQT9 956 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ABHD14AQ9BUJ0 271 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ZNF747Q9BV97 191 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 GATA5Q9BWX5 397 aaPredicted RBP4.45□□□□□ -1.7
FN1-222ENST00000485567 HDHD5Q9BXW7 423 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
FN1-222ENST00000485567 VEZTQ9HBM0 779 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 ERVK-5Q9HDB9 667 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 TXNRD2Q9NNW7 524 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 SLC17A6Q9P2U8 582 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 SLC25A13Q9UJS0 675 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 DTX4Q9Y2E6 619 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 KDM3AQ9Y4C1 1321 aa4.45□□□□□ -1.7
FN1-222ENST00000485567 TMEM232C9JQI7 657 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 GCATO75600 419 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 HLA-DQA2P01906 255 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 HNRNPCP07910 306 aaKnown RBP eCLIP4.44□□□□□ -1.7
FN1-222ENST00000485567 HSPA1AP0DMV8 641 aaKnown RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 HSPA1BP0DMV9 641 aaKnown RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 UBL4AP11441 157 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 GSTM2P28161 218 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 GGT5P36269 586 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 MTNR1AP48039 350 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 POLD2P49005 469 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 BYSLQ13895 437 aaKnown RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 PUM1Q14671 1186 aaKnown RBP eCLIP4.44□□□□□ -1.7
FN1-222ENST00000485567 NAA25Q14CX7 972 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 PFKFB3Q16875 520 aaPredicted RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 GXYLT1Q4G148 440 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 VWA5B1Q5TIE3 1220 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 TTLL5Q6EMB2 1281 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 AADACL2Q6P093 401 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 SLC22A25Q6T423 547 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 KRBA2Q6ZNG9 492 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 Q6ZPA2 131 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 FAM43BQ6ZT52 329 aaPredicted RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 RFX6Q8HWS3 928 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 BRSK2Q8IWQ3 736 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 DIS3L2Q8IYB7 885 aaKnown RBP4.44□□□□□ -1.7
FN1-222ENST00000485567 NGEFQ8N5V2 710 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 NEUROD6Q96NK8 337 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.7
FN1-222ENST00000485567 NUAK2Q9H093 628 aa4.44□□□□□ -1.7
FN1-222ENST00000485567 TMEM247A6NEH6 219 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 KCNJ18B7U540 433 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 NPIPB8E9PQR5 432 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 POC1B-GALNT4F8VUJ3 575 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 UBE2Q2LH0YL09 131 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 SYN3O14994 580 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CLEC3BP05452 202 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 URODP06132 367 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CHRM4P08173 479 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 COX7A2P14406 83 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CACNA2D1P54289 1103 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 SLC14A1Q13336 389 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 EIF4A2Q14240 407 aaKnown RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 ERV3-1Q14264 604 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 KCTD2Q14681 263 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 ZNF474Q6S9Z5 364 aaPredicted RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 ATF7IPQ6VMQ6 1270 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 RANBP10Q6VN20 620 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 RTL10Q7L3V2 364 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 MDGA2Q7Z553 956 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 PRRT2Q7Z6L0 340 aaPredicted RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 VPS52Q8N1B4 723 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CCDC89Q8N998 374 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 FAM110DQ8TAY7 271 aaPredicted RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 C2CD4CQ8TF44 421 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 RAB40AQ8WXH6 277 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 CNOT9Q92600 299 aaKnown RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 UROC1Q96N76 676 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 EYA3Q99504 573 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 BARD1Q99728 777 aaKnown RBP4.43□□□□□ -1.7
FN1-222ENST00000485567 USP44Q9H0E7 712 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 TMEM248Q9NWD8 314 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 KCND2Q9NZV8 630 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 PACSIN3Q9UKS6 424 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 SLC45A1Q9Y2W3 748 aa4.43□□□□□ -1.7
FN1-222ENST00000485567 EMSYQ7Z589 1322 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms