RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 SIN3BO75182 1162 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 CLDN11O75508 207 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ENDOD1O94919 500 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 OXTRP30559 389 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 CDH4P55283 916 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 RPS14P62263 151 aaKnown RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 NR1I3Q14994 352 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 CDO1Q16878 200 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ALFQ53S48 1182 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 FAM124AQ86V42 546 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 KDM1BQ8NB78 822 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ALG14Q96F25 216 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 C1orf74Q96LT6 269 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 FEM1AQ9BSK4 669 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 SYT11Q9BT88 431 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 RSPH9Q9H1X1 276 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 EVLQ9UI08 416 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-209ENST00000484305 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 TBC1D30Q9Y2I9 924 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 ITIH6Q6UXX5 1313 aa13.28□□□□□ -0.28
HDAC1-209ENST00000484305 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 C2CD4BA6NLJ0 364 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 LRRC53A6NM62 1247 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 DRGXA6NNA5 263 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 E9PAM4 449 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 TM4SF5O14894 197 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 SERPINC1P01008 464 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 CFIP05156 583 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 CALB1P05937 261 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 CCDC172P0C7W6 258 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 KRT3P12035 628 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 MAOBP27338 520 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 SDC4P31431 198 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 RFC1P35251 1148 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-209ENST00000484305 DPP6P42658 865 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 OXCT1P55809 520 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-209ENST00000484305 SULT2A1Q06520 285 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 RNF219Q5W0B1 726 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-209ENST00000484305 ZNF776Q68DI1 518 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-209ENST00000484305 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 C3orf20Q8ND61 904 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 PTPRN2Q92932 1015 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 FOXJ1Q92949 421 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 HAPLN3Q96S86 360 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 NUP58Q9BVL2 599 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 OR51B4Q9Y5P0 310 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 PCDH15Q96QU1 1955 aa13.27□□□□□ -0.29
HDAC1-209ENST00000484305 CNOT1A5YKK6 2376 aaKnown RBP13.27□□□□□ -0.29
HDAC1-209ENST00000484305 IGLV3-10A0A075B6K4 115 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 EDDM13A0A1B0GTR0 161 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TCRBV5S1A1TA0A578 114 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 MED19A0JLT2 244 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TARSL2A2RTX5 802 aaKnown RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 SIGLEC16A6NMB1 481 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 CDX4O14627 284 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 DNTTP04053 509 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 VAV1P15498 845 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 PTMSP20962 102 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 ACSL1P33121 698 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 HOXD12P35452 270 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 PTPN9P43378 593 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 FOXK2Q01167 660 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 ZBTB16Q05516 673 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 DUOXA1Q1HG43 343 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 SYCP2LQ5T4T6 812 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 E4F1Q66K89 784 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 ACAD10Q6JQN1 1059 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 WDR59Q6PJI9 974 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 LRRC31Q6UY01 552 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 RGL4Q8IZJ4 473 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 CADM4Q8NFZ8 388 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 FRS2Q8WU20 508 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 CENPIQ92674 756 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 PPP1R9BQ96SB3 815 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 FAM129BQ96TA1 746 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 NUSAP1Q9BXS6 441 aaKnown RBP13.26□□□□□ -0.29
HDAC1-209ENST00000484305 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 TTYH3Q9C0H2 523 aa13.26□□□□□ -0.29
HDAC1-209ENST00000484305 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms