RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 STK40Q8N2I9 435 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
NUP50-215ENST00000484186 TMEM35BQ8NCS4 154 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 SETD7Q8WTS6 366 aaKnown RBP9.72□□□□□ -0.85
NUP50-215ENST00000484186 GATA6Q92908 595 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 IGSF8Q969P0 613 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 ALG14Q96F25 216 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 NPY6RQ99463 290 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 OMDQ99983 421 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 ORAI3Q9BRQ5 295 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 TMEM121BQ9BXQ6 578 aaPredicted RBP9.72□□□□□ -0.85
NUP50-215ENST00000484186 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
NUP50-215ENST00000484186 RRN3Q9NYV6 651 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 SERGEFQ9UGK8 458 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 PCOLCE2Q9UKZ9 415 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 VANGL2Q9ULK5 521 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 ANKRD6Q9Y2G4 727 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 MSRB2Q9Y3D2 182 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 NEUROG3Q9Y4Z2 214 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 PCDHGB2Q9Y5G2 931 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 HS3ST4Q9Y661 456 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
NUP50-215ENST00000484186 MAP1BP46821 2468 aaKnown RBP9.72□□□□□ -0.85
NUP50-215ENST00000484186 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 A0A1W2PPC4 97 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FAM221BA6H8Z2 402 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 LRRC72A6NJI9 287 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 PAGE1O75459 146 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 CLDN11O75508 207 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 RNASEH2AO75792 299 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 ADH1BP00325 375 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 F9P00740 461 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 GOT1P17174 413 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 C5AR1P21730 350 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 EEF1GP26641 437 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 CXCR3P49682 368 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 NUMBP49757 651 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 STK19P49842 368 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 CDH4P55283 916 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 RACK1P63244 317 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 CENPCQ03188 943 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 ZNF177Q13360 481 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 ELAVL3Q14576 367 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 C5orf22Q49AR2 442 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 TCP11X2Q5H9J9 407 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 BRMS1LQ5PSV4 323 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 NCEH1Q6PIU2 408 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 LRSAM1Q6UWE0 723 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 SND1Q7KZF4 910 aaKnown RBP eCLIP9.71□□□□□ -0.86
NUP50-215ENST00000484186 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 C14orf80Q86SX3 495 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 GLRX5Q86SX6 157 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 ERICH1Q86X53 443 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 OR2T34Q8NGX1 318 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 RHBDD1Q8TEB9 315 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FRS2Q8WU20 508 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 NT5C3BQ969T7 300 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 C18orf8Q96DM3 657 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 PGAP3Q96FM1 320 aaPredicted RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 FEM1AQ9BSK4 669 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 STK33Q9BYT3 514 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 SIK2Q9H0K1 926 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 WDCPQ9H6R7 721 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 PIGVQ9NUD9 493 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 TMEM51Q9NW97 253 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 ARHGEF38Q9NXL2 777 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.71□□□□□ -0.86
NUP50-215ENST00000484186 KLK13Q9UKR3 277 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FZD4Q9ULV1 537 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 STAP1Q9ULZ2 295 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 FNDC3AQ9Y2H6 1198 aaKnown RBP9.71□□□□□ -0.86
NUP50-215ENST00000484186 FHOD1Q9Y613 1164 aa9.71□□□□□ -0.86
NUP50-215ENST00000484186 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
NUP50-215ENST00000484186 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 C10orf142B7Z368 130 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 KCNK3O14649 394 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 FLRT2O43155 660 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 ATP9BO43861 1147 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 ADCY5O95622 1261 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 IL1BP01584 269 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 UCHL3P15374 230 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 VAV1P15498 845 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 TFE3P19532 575 aaPredicted RBP9.7□□□□□ -0.86
NUP50-215ENST00000484186 SCNN1AP37088 669 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 PSMD8P48556 350 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 SULT1E1P49888 294 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 IRAK1P51617 712 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 CCR5P51681 352 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 ACCSLQ4AC99 568 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 KCNT1Q5JUK3 1230 aa9.7□□□□□ -0.86
NUP50-215ENST00000484186 OTUD1Q5VV17 481 aaPredicted RBP9.7□□□□□ -0.86
NUP50-215ENST00000484186 TAF3Q5VWG9 929 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms