RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 NUP85Q9BW27 656 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 ZYG11BQ9C0D3 744 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 SLC6A17Q9H1V8 727 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 EPC1Q9H2F5 836 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 TMEM245Q9H330 911 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 ZNF212Q9UDV6 495 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 PLA2G4CQ9UP65 541 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 INVSQ9Y283 1065 aa27.25■■□□□ 1.95
GTF3C4-202ENST00000483873 PRR23AA6NEV1 266 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 MOCS3O95396 460 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 EPHX1P07099 455 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 DESP17661 470 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 SLC12A1Q13621 1099 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 RNF219Q5W0B1 726 aaPredicted RBP27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 SUMF1Q8NBK3 374 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 SPC24Q8NBT2 197 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 GPATCH2LQ9NWQ4 482 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 OR51B4Q9Y5P0 310 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 FRYLO94915 3013 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 LRIG2O94898 1065 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 ASLP04424 464 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 RHOCP08134 193 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 NDUFV2P19404 249 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 E2F5Q15329 346 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 LPAL2Q16609 132 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 EFHC2Q5JST6 749 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 PGBD3Q8N328 593 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 GAB3Q8WWW8 586 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 CCDC42Q96M95 316 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 FEM1AQ9BSK4 669 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 SEMA4AQ9H3S1 761 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 PPARGC1AQ9UBK2 798 aaKnown RBP27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 PCSK1NQ9UHG2 260 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 ANAPC7Q9UJX3 599 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 ERVW-1Q9UQF0 538 aa27.24■■□□□ 1.95
GTF3C4-202ENST00000483873 CHD5Q8TDI0 1954 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 ZFHX2Q9C0A1 2572 aaPredicted RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 DCLK1O15075 740 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 LRCH4O75427 683 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 RPP40O75818 363 aaKnown RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 LMNAP02545 664 aaKnown RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 CNR2P34972 360 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 STK19P49842 368 aaPredicted RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 PLK1P53350 603 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 OXCT1P55809 520 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 SIM2Q14190 667 aaPredicted RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 STARD3Q14849 445 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 RWDD4Q6NW29 188 aaKnown RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 PRR23BQ6ZRT6 265 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 RPL10LQ96L21 214 aaKnown RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 MTG2Q9H4K7 406 aa27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 SMG5Q9UPR3 1016 aaKnown RBP27.23■■□□□ 1.95
GTF3C4-202ENST00000483873 RNF8O76064 485 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 MIPP30301 263 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 OR1E1P30953 314 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 ECT2LQ008S8 904 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 CYP4V2Q6ZWL3 525 aaPredicted RBP27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 RLN3Q8WXF3 142 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 TBC1D31Q96DN5 1066 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 MUC3BQ9H195 1237 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 NDFIP2Q9NV92 336 aa27.22■■□□□ 1.95
GTF3C4-202ENST00000483873 A0A0D9SEW6 157 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 SYNCRIPO60506 623 aaKnown RBP27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 TCF4P15884 667 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 AIF1P55008 147 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 CA9Q16790 459 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 CEP68Q76N32 757 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 SETD3Q86TU7 594 aaPredicted RBP27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 NLRP14Q86W24 1093 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 MRGPRX1Q96LB2 322 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 PSMB7Q99436 277 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 SNRNP25Q9BV90 132 aaKnown RBP27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 MKRN2Q9H000 416 aaKnown RBP27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 CD93Q9NPY3 652 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 SLCO3A1Q9UIG8 710 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 VPS28Q9UK41 221 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 AP4E1Q9UPM8 1137 aa27.21■■□□□ 1.95
GTF3C4-202ENST00000483873 WDR87Q6ZQQ6 2873 aa27.2■■□□□ 1.95
GTF3C4-202ENST00000483873 H2AFZP0C0S5 128 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 L1CAMP32004 1257 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 COPAP53621 1224 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 ST8SIA6P61647 398 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 SEMA3BQ13214 749 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 H2AFVQ71UI9 128 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 FRMD1Q8N878 549 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 OR7D4Q8NG98 312 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 ZNF564Q8TBZ8 553 aaPredicted RBP27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 CTNNBL1Q8WYA6 563 aaPredicted RBP27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 THADAQ6YHU6 1953 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 ABCA7Q8IZY2 2146 aa27.2■■□□□ 1.94
GTF3C4-202ENST00000483873 TTC34A8MYJ7 566 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 CREB3O43889 395 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 GFRA3O60609 400 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 SRPRAP08240 638 aaKnown RBP27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 RHOQP17081 205 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 CAMK2GQ13555 558 aaPredicted RBP27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 USP39Q53GS9 565 aaKnown RBP27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 C6orf118Q5T5N4 469 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 KBTBD6Q86V97 674 aa27.19■■□□□ 1.94
GTF3C4-202ENST00000483873 CACUL1Q86Y37 369 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms