RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MAFKO60675 156 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 CNTN5O94779 1100 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 HMBSP08397 361 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 KRT4P19013 534 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 ATP5DP30049 168 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 TBX4P57082 545 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 SF3A3Q12874 501 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 RASA2Q15283 850 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 SMAD1Q15797 465 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 USP41Q3LFD5 358 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 TEX44Q53QW1 395 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 ALFQ53S48 1182 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 MS4A13Q5J8X5 152 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 C10orf120Q5SQS8 335 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 PDZD4Q76G19 769 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 OTOP3Q7RTS5 596 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 RIBC1Q8N443 379 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF473Q8WTR7 871 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPATA17Q96L03 361 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 CYTH2Q99418 400 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 KLF6Q99612 283 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 MLPHQ9BV36 600 aaPredicted RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 C12orf65Q9H3J6 166 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRABDQ9H4I3 376 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 IL1RAPL1Q9NZN1 696 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 FETUBQ9UGM5 382 aa9.06□□□□□ -0.96
CDC42SE1-204ENST00000483763 SHROOM3Q8TF72 1996 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 H7C4K7 107 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZDHHC11BP0C7U3 371 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 MX2P20592 715 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 MGAT1P26572 445 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 RPA3P35244 121 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 RFC2P35250 354 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 FDFT1P37268 417 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 C9orf50Q5SZB4 431 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPOUT1Q5T280 376 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 KCTD11Q693B1 232 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRRC8BQ6P9F7 803 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TFAP2DQ7Z6R9 452 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 GDAP1Q8TB36 358 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 USP33Q8TEY7 942 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC44A1Q8WWI5 657 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 AUTS2Q8WXX7 1259 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 IGSF8Q969P0 613 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 OXNAD1Q96HP4 312 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 FRMD8Q9BZ67 464 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 CLIC5Q9NZA1 410 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 MARCH2Q9P0N8 246 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC17A6Q9P2U8 582 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 GRID1Q9ULK0 1009 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 ACTL7BQ9Y614 415 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 PLXNA3P51805 1871 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 GREB1Q4ZG55 1949 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 HMX2A2RU54 273 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC38A8A6NNN8 435 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 ANKRD65E5RJM6 399 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TYROBPO43914 113 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TLR5O60602 858 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 STK10O94804 968 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 APOEP02649 317 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 CSH1P0DML2 217 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 CSH2P0DML3 217 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TSHRP16473 764 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 NFKB1P19838 968 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 DRD4P21917 467 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 PRKCHP24723 683 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SERPINB6P35237 376 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 MSH2P43246 934 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 KCNQ1P51787 676 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF135P52742 658 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 KLHL38Q2WGJ6 581 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 KIAA1841Q6NSI8 718 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 CES3Q6UWW8 571 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SH2D5Q6ZV89 423 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 CIR1Q86X95 450 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TMEM199Q8N511 208 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 PPM1NQ8N819 430 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 OR52K1Q8NGK4 314 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPATA22Q8NHS9 363 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 DENND1AQ8TEH3 1009 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SERAC1Q96JX3 654 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 C1orf74Q96LT6 269 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TEKT5Q96M29 485 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 APOL2Q9BQE5 337 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 XAB2Q9HCS7 855 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 TLR8Q9NR97 1041 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 SYBUQ9NX95 663 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 RAD54BQ9Y620 910 aa9.05□□□□□ -0.96
CDC42SE1-204ENST00000483763 GOLGA6L7A0A1B0GV03 622 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SOX1O00570 391 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 RTN3O95197 1032 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 MT-CYBP00156 380 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CPP00450 1065 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 IGLV3-27P01718 113 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms