RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 VANGL2Q9ULK5 521 aa14.4□□□□□ -0.1
CLK3-204ENST00000483723 LZTS1Q9Y250 596 aa14.4□□□□□ -0.1
CLK3-204ENST00000483723 IRAK3Q9Y616 596 aa14.4□□□□□ -0.1
CLK3-204ENST00000483723 SHROOM3Q8TF72 1996 aa14.4□□□□□ -0.1
CLK3-204ENST00000483723 PRRG1O14668 218 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 ZBTB24O43167 697 aaPredicted RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 CDH16O75309 829 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 AVILO75366 819 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 SPAG6O75602 509 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 OAS1P00973 400 aaKnown RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 F11P03951 625 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 PSMB4P28070 264 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 PHBP35232 272 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 SLCO1A2P46721 670 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 KCNQ1P51787 676 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 EPHB3P54753 998 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 SARNPP82979 210 aaKnown RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 ZBTB17Q13105 803 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 DNAJC21Q5F1R6 531 aaKnown RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 SYCP2LQ5T4T6 812 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 LRRC8BQ6P9F7 803 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 TMEM150AQ86TG1 271 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 PALM2Q8IXS6 379 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 MAML1Q92585 1016 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 IGSF8Q969P0 613 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 ACSS3Q9H6R3 686 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 VPS37BQ9H9H4 285 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 SEPT10Q9P0V9 454 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 UXTQ9UBK9 157 aaPredicted RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 ASB3Q9Y575 518 aa14.39□□□□□ -0.11
CLK3-204ENST00000483723 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
CLK3-204ENST00000483723 MATN3O15232 486 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ACSL4O60488 711 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 SUN1O94901 812 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 CXCL14O95715 111 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 HMBSP08397 361 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 GSTA2P09210 222 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 BMPR1AP36894 532 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 IRAK1P51617 712 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ALFQ53S48 1182 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 RAP1GAP2Q684P5 730 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 KCTD11Q693B1 232 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ARHGAP36Q6ZRI8 547 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 CNTD1Q8N815 330 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 PDCD7Q8N8D1 485 aaKnown RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 PLD4Q96BZ4 506 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 KLHL5Q96PQ7 755 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 KLF16Q9BXK1 252 aaPredicted RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 CEP41Q9BYV8 373 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 RNF38Q9H0F5 515 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 GBA3Q9H227 469 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 SLC24A2Q9UI40 661 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 CHMP2BQ9UQN3 213 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ERI2A8K979 691 aaKnown RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 TGM5O43548 720 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 CNTN5O94779 1100 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 JCHAINP01591 159 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ATP2A2P16615 1042 aaKnown RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 TACR2P21452 398 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 GRIA1P42261 906 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 PAPOLAP51003 745 aaKnown RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 PLD1Q13393 1074 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ITPRIPL1Q6GPH6 555 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
CLK3-204ENST00000483723 ITIH5Q86UX2 942 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 EXOC3L1Q86VI1 746 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 PLAC1Q9HBJ0 212 aa14.38□□□□□ -0.11
CLK3-204ENST00000483723 OBSL1O75147 1896 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 GOLGA6L7A0A1B0GV03 622 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 EXOC1LA0A1B0GW35 172 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 DFFAO00273 331 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 TRDMT1O14717 391 aaKnown RBP14.37□□□□□ -0.11
CLK3-204ENST00000483723 STC2O76061 302 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 AP2A1O95782 977 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 C1QAP02745 245 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 CCNB1P14635 433 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 ATP5DP30049 168 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 IFNAR2P48551 515 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 TAF12Q16514 161 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 CYS1Q717R9 158 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 C7orf61Q8IZ16 206 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 CYP4X1Q8N118 509 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
CLK3-204ENST00000483723 LRRC3Q9BY71 257 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 ZNF334Q9HCZ1 680 aaPredicted RBP14.37□□□□□ -0.11
CLK3-204ENST00000483723 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
CLK3-204ENST00000483723 MTCL1Q9Y4B5 1905 aaKnown RBP14.36□□□□□ -0.11
CLK3-204ENST00000483723 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms