RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ZNF653Q96CK0 615 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 SPACA7Q96KW9 195 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 FEM1AQ9BSK4 669 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 MKRN2Q9H000 416 aaKnown RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 DUSP15Q9H1R2 295 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-225ENST00000483506 OR12D3Q9UGF7 316 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 GMEB2Q9UKD1 530 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 NEU3Q9UQ49 428 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 ERVW-1Q9UQF0 538 aa18.52■□□□□ 0.56
HDAC6-225ENST00000483506 DCLK1O15075 740 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 LRP3O75074 770 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ZNF217O75362 1048 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 HLA-EP13747 358 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 CTSOP43234 321 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ZNF252P-AS1Q0IIN9 211 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 TBX2Q13207 712 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 LPAL2Q16609 132 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ASTE1Q2TB18 679 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 HNRNPA1L2Q32P51 320 aaKnown RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 PMS2CLQ68D20 193 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ZNF783Q6ZMS7 281 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 TMC6Q7Z403 805 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 SLFN11Q7Z7L1 901 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ABCA7Q8IZY2 2146 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 PGBD3Q8N328 593 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 OR2T3Q8NH03 318 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 ZYG11BQ9C0D3 744 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 MPP6Q9NZW5 540 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 NCDNQ9UBB6 729 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 SUN2Q9UH99 717 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 MBD1Q9UIS9 605 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-225ENST00000483506 CHD5Q8TDI0 1954 aa18.51■□□□□ 0.55
HDAC6-225ENST00000483506 NYNRINQ9P2P1 1898 aaKnown RBP18.5■□□□□ 0.55
HDAC6-225ENST00000483506 SSU72P8A0A1W2PR75 194 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 MFAP3LO75121 409 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 RHOBTB1O94844 696 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 EPN2O95208 641 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 TPM1P09493 284 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 DESP17661 470 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 BCKDHBP21953 392 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 ST8SIA6P61647 398 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 SPDYCQ5MJ68 293 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 C6orf118Q5T5N4 469 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 ALKBH5Q6P6C2 394 aaKnown RBP18.5■□□□□ 0.55
HDAC6-225ENST00000483506 RLN3Q8WXF3 142 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 PRDM16Q9HAZ2 1276 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 MRPL47Q9HD33 250 aaKnown RBP18.5■□□□□ 0.55
HDAC6-225ENST00000483506 PRSS16Q9NQE7 514 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 ABHD10Q9NUJ1 306 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 USP36Q9P275 1121 aaKnown RBP18.5■□□□□ 0.55
HDAC6-225ENST00000483506 PCDHGA5Q9Y5G8 931 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 SDK1Q7Z5N4 2213 aa18.5■□□□□ 0.55
HDAC6-225ENST00000483506 ILVBLA1L0T0 632 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 FAM72CH0Y354 149 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 SRGAP2O75044 1071 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 LRIG2O94898 1065 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 IGLV3-19P01714 112 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 RHOCP08134 193 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 TGM1P22735 817 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 PSMA2P25787 234 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 L1CAMP32004 1257 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 EIF4A3P38919 411 aaKnown RBP18.49■□□□□ 0.55
HDAC6-225ENST00000483506 SEMA3BQ13214 749 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 ELF2Q15723 593 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 FAM72AQ5TYM5 149 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 FAM72DQ6L9T8 149 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 NLRP14Q86W24 1093 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 FAM72BQ86X60 149 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 TMPRSS6Q8IU80 811 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 DCLK2Q8N568 766 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 ARFGAP1Q8N6T3 406 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 GPR161Q8N6U8 529 aaKnown RBP18.49■□□□□ 0.55
HDAC6-225ENST00000483506 PSMB7Q99436 277 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 TRIM7Q9C029 511 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 SLC6A17Q9H1V8 727 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 TMEM248Q9NWD8 314 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 FZD10Q9ULW2 581 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 INVSQ9Y283 1065 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 THADAQ6YHU6 1953 aa18.49■□□□□ 0.55
HDAC6-225ENST00000483506 TNRC6BQ9UPQ9 1833 aaKnown RBP18.49■□□□□ 0.55
HDAC6-225ENST00000483506 IGHV1OR15-9A0A0B4J2B8 117 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
HDAC6-225ENST00000483506 CYP1A2P05177 515 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 RHOQP17081 205 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 OR1E1P30953 314 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 MAPKAPK2P49137 400 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 ACAP1Q15027 740 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 SLC18A3Q16572 532 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 EFHC2Q5JST6 749 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 RNF219Q5W0B1 726 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-225ENST00000483506 TFAP2DQ7Z6R9 452 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 GAS2L3Q86XJ1 694 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 CNGA4Q8IV77 575 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 FRMD1Q8N878 549 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 ZNF366Q8N895 744 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 DCAF4L2Q8NA75 395 aa18.48■□□□□ 0.55
HDAC6-225ENST00000483506 TBC1D31Q96DN5 1066 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms