RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 MICAL3Q7RTP6 2002 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 IGLV3-10A0A075B6K4 115 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 WDR27A2RRH5 827 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TCP11X1B4DZS4 312 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MAFKO60675 156 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MOCS2O96007 188 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MGAT1P26572 445 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 RPA3P35244 121 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 EFEMP1Q12805 493 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SPARCL1Q14515 664 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ZNF449Q6P9G9 518 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SRLQ86TD4 932 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ATPAF2Q8N5M1 289 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 CNTD1Q8N815 330 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 GDAP1Q8TB36 358 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 AGAP3Q96P47 875 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TRIM56Q9BRZ2 755 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MATN3O15232 486 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TM9SF1O15321 606 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ADAM12O43184 909 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 JCHAINP01591 159 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MT-ND3P03897 115 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ATF6P18850 670 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 NFKB1P19838 968 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 CA4P22748 312 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SESN2P58004 480 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 RING1Q06587 406 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 FRG1Q14331 258 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 LGSNQ5TDP6 509 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ARHGAP36Q6ZRI8 547 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 TAX1BP1Q86VP1 789 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 CTAGE3PQ8IX95 158 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ATP6V0D2Q8N8Y2 350 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 BTN2A3PQ96KV6 586 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 UBE2OQ9C0C9 1292 aaKnown RBP13.55□□□□□ -0.24
CPNE1-225ENST00000483495 NDFIP2Q9NV92 336 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 MARCH2Q9P0N8 246 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 HSFX1Q9UBD0 423 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 FAM169AQ9Y6X4 670 aa13.55□□□□□ -0.24
CPNE1-225ENST00000483495 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 DFFAO00273 331 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 PSMD3O43242 534 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 KRT37O76014 449 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 UPP2O95045 317 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TBX18O95935 607 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 CSH1P0DML2 217 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 CSH2P0DML3 217 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 CCNB1P14635 433 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 RHOQP17081 205 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TAC1P20366 129 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 FOXN2P32314 431 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 MTA1Q13330 715 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 NAB1Q13506 487 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 PSMD5Q16401 504 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 MARK2Q7KZI7 788 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 OR52K1Q8NGK4 314 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 FATE1Q969F0 183 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TOP1MTQ969P6 601 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 ZNF689Q96CS4 500 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 MTBPQ96DY7 904 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 SERAC1Q96JX3 654 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 TGS1Q96RS0 853 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 LRRC40Q9H9A6 602 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 DONSONQ9NYP3 566 aa13.54□□□□□ -0.24
CPNE1-225ENST00000483495 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
CPNE1-225ENST00000483495 ABHD14A-ACY1A0A1B0GW23 586 aa13.53□□□□□ -0.24
CPNE1-225ENST00000483495 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
CPNE1-225ENST00000483495 SERPINB9P50453 376 aa13.53□□□□□ -0.24
CPNE1-225ENST00000483495 NEK3P51956 506 aa13.53□□□□□ -0.24
CPNE1-225ENST00000483495 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-225ENST00000483495 NDST2P52849 883 aa13.53□□□□□ -0.24
CPNE1-225ENST00000483495 CRADDP78560 199 aa13.53□□□□□ -0.24
CPNE1-225ENST00000483495 ITIH4Q14624 930 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms