RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 LRIG2O94898 1065 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 EPHX1P07099 455 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 MZF1P28698 734 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-214ENST00000482733 MIPP30301 263 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 OR1E1P30953 314 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 NNMTP40261 264 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 MAPKAPK2P49137 400 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
HMGN1-214ENST00000482733 USP39Q53GS9 565 aaKnown RBP17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ARTNQ5T4W7 220 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 RWDD4Q6NW29 188 aaKnown RBP17.05■□□□□ 0.32
HMGN1-214ENST00000482733 TFAP2DQ7Z6R9 452 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ARFGAP1Q8N6T3 406 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 MDGA1Q8NFP4 955 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF564Q8TBZ8 553 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ALG14Q96F25 216 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 MUC3BQ9H195 1237 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 EPC1Q9H2F5 836 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 SPTLC3Q9NUV7 552 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 DONSONQ9NYP3 566 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 IMPACTQ9P2X3 320 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 VPS28Q9UK41 221 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 INTUQ9ULD6 942 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ERVW-1Q9UQF0 538 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
HMGN1-214ENST00000482733 ILVBLA1L0T0 632 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 FAM72CH0Y354 149 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 LRCH4O75427 683 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 PRKCHP24723 683 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 HOXC13P31276 330 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF135P52742 658 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-214ENST00000482733 KRT83P78385 493 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 FAM72AQ5TYM5 149 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 FAM72DQ6L9T8 149 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 KIAA1211LQ6NV74 962 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-214ENST00000482733 C11orf74Q86VG3 221 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 FAM72BQ86X60 149 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 TMTC1Q8IUR5 882 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 PGBD3Q8N328 593 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 HMGB4Q8WW32 186 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 GAB3Q8WWW8 586 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 C2orf49Q9BVC5 232 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-214ENST00000482733 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 FBRSQ9HAH7 460 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 TMEM248Q9NWD8 314 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF212Q9UDV6 495 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 PCSK1NQ9UHG2 260 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 SLC25A13Q9UJS0 675 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 AP4E1Q9UPM8 1137 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 OR51B4Q9Y5P0 310 aa17.04■□□□□ 0.32
HMGN1-214ENST00000482733 GOLGA6L6A8MZA4 724 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 HRO43593 1189 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
HMGN1-214ENST00000482733 LMNAP02545 664 aaKnown RBP17.03■□□□□ 0.32
HMGN1-214ENST00000482733 GABRG2P18507 467 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 EPHB2P29323 1055 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 CYLC1P35663 651 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-214ENST00000482733 ETFBP38117 255 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 NLRP14Q86W24 1093 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 MRGPRX3Q96LB0 322 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 CATSPERBQ9H7T0 1116 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 LUC7LQ9NQ29 371 aaKnown RBP17.03■□□□□ 0.32
HMGN1-214ENST00000482733 RAB23Q9ULC3 237 aa17.03■□□□□ 0.32
HMGN1-214ENST00000482733 FGF10O15520 208 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 CREB3O43889 395 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF217O75362 1048 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 LCA5LO95447 670 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 FECHP22830 423 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 CTSOP43234 321 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 SEMA3BQ13214 749 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 CAMK2GQ13555 558 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 SIM2Q14190 667 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 SPA17Q15506 151 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 HNRNPA1L2Q32P51 320 aaKnown RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 CEP68Q76N32 757 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 RHOT2Q8IXI1 618 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 DCAF4L2Q8NA75 395 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 OR52K2Q8NGK3 314 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 OR2T3Q8NH03 318 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 MYO19Q96H55 970 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 SPACA7Q96KW9 195 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 PEBP4Q96S96 227 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 PHOX2BQ99453 314 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 MAGEB5Q9BZ81 275 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 TPSD1Q9BZJ3 242 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 DHX35Q9H5Z1 703 aaKnown RBP17.02■□□□□ 0.32
HMGN1-214ENST00000482733 NEU3Q9UQ49 428 aa17.02■□□□□ 0.32
HMGN1-214ENST00000482733 CXorf51AA0A1B0GTR3 108 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 TARSL2A2RTX5 802 aaKnown RBP17.01■□□□□ 0.31
HMGN1-214ENST00000482733 WASH4PA8MWX3 477 aa17.01■□□□□ 0.31
HMGN1-214ENST00000482733 PROSCO94903 275 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms