RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SLC35F3Q8IY50 421 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 GPATCH11Q8N954 259 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 CHDHQ8NE62 594 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 ZNF548Q8NEK5 533 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 UCMAQ8WVF2 138 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 STARD8Q92502 1023 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 NRGNQ92686 78 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 ZBTB45Q96K62 511 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 GFM1Q96RP9 751 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 PKMYT1Q99640 499 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 ACO2Q99798 780 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 MYOCQ99972 504 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 TSPAN10Q9H1Z9 355 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 GPN2Q9H9Y4 310 aaPredicted RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 SLAMF7Q9NQ25 335 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 WDR35Q9P2L0 1181 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 GTF3C4Q9UKN8 822 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CLEC4EQ9ULY5 219 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 NCKAP1Q9Y2A7 1128 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 SLC27A6Q9Y2P4 619 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 KCTD3Q9Y597 815 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 OAS3Q9Y6K5 1087 aaKnown RBP6.79□□□□□ -1.32
CHD6-209ENST00000482596 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
CHD6-209ENST00000482596 CYB561D2O14569 222 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 MID1O15344 667 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 OIP5O43482 229 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 HCRTO43612 131 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 RAD1O60671 282 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 RNASEH2AO75792 299 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 TCN2P20062 427 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 RARRES1P49788 294 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 PSMA6P60900 246 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 MYL7Q01449 175 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 RUNX1T1Q06455 604 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 CDK18Q07002 472 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 AAMPQ13685 434 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 PTK2BQ14289 1009 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 PDIA5Q14554 519 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 STAT4Q14765 748 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 EPHA7Q15375 998 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 NFE2Q16621 373 aaPredicted RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 BMT2Q1RMZ1 405 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 ZNF776Q68DI1 518 aaPredicted RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 LINGO4Q6UY18 593 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 ZNF662Q6ZS27 426 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 METTL23Q86XA0 190 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 DEPTORQ8TB45 409 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 CYB5D2Q8WUJ1 264 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 LEO1Q8WVC0 666 aaPredicted RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 CENPTQ96BT3 561 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.326e-6■■■■□ 23.4
CHD6-209ENST00000482596 PIWIL1Q96J94 861 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 PYM1Q9BRP8 204 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
CHD6-209ENST00000482596 CALN1Q9BXU9 219 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 TRIM55Q9BYV6 548 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 ZMYND12Q9H0C1 365 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 DCTPP1Q9H773 170 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 ZSWIM4Q9H7M6 989 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 NEUROD4Q9HD90 331 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 OSGIN2Q9Y236 505 aa6.78□□□□□ -1.32
CHD6-209ENST00000482596 NYNRINQ9P2P1 1898 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 MDC1Q14676 2089 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 RYR3Q15413 4870 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 SLC12A8A0AV02 714 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 TMX2-CTNND1H3BSU7 103 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 hCG_1984214I3L0E3 225 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 C19orf84I3L1E1 186 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 KCNN4O15554 427 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 SLC37A4O43826 429 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 SLITRK3O94933 977 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 RPLP0P05388 317 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 MAPTP10636 758 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 HNRNPH3P31942 346 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 NOP2P46087 812 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 COPB1P53618 953 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 ADPRHP54922 357 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 TNP2Q05952 138 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 ZFP36L1Q07352 338 aaKnown RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 OVGP1Q12889 678 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 TAF10Q12962 218 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 C16orf72Q14CZ0 275 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 ECM1Q16610 540 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 ARHGAP44Q17R89 818 aa6.77□□□□□ -1.33
CHD6-209ENST00000482596 ZNF630Q2M218 657 aaPredicted RBP6.77□□□□□ -1.33
CHD6-209ENST00000482596 FNDC3BQ53EP0 1204 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms