RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TNFAIP8O95379 198 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 DPEP1P16444 411 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 TSHRP16473 764 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 HDCP19113 662 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 ME2P23368 584 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CPOXP36551 454 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 LSM12Q3MHD2 195 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 AGKQ53H12 422 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 GK5Q6ZS86 529 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 PNPLA1Q8N8W4 532 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
VPS52-218ENST00000482399 IPMKQ8NFU5 416 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 PDCD6IPQ8WUM4 868 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 LRRC39Q96DD0 335 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 MCRS1Q96EZ8 462 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SPATA13Q96N96 652 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 DPEP3Q9H4B8 488 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 EFCAB1Q9HAE3 211 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CHRAC1Q9NRG0 131 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 MAP3K20Q9NYL2 800 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 STYXL1Q9Y6J8 313 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 NFASCO94856 1347 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 FAM159BA6NKW6 160 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 EEF2KO00418 725 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 GIPC1O14908 333 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 DNAJA2O60884 412 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 JCHAINP01591 159 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SLC4A1P02730 911 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 RPL10P27635 214 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 CTBP1Q13363 440 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 ITPRIPL1Q6GPH6 555 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CATSPER4Q7RTX7 472 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CYGBQ8WWM9 190 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 PKP2Q99959 881 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 CDH19Q9H159 772 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 TRPC7Q9HCX4 862 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CNTN6Q9UQ52 1028 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 PPEF2O14830 753 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 BUD23O43709 281 aaKnown RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 TMCC1O94876 653 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 ZFXP17010 805 aaPredicted RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 PGAM1P18669 254 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 AKAP5P24588 427 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
VPS52-218ENST00000482399 ESRRGP62508 458 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 PCSK7Q16549 785 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 CMPK2Q5EBM0 449 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 SLC9A4Q6AI14 798 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 ACTRT2Q8TDY3 377 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
VPS52-218ENST00000482399 A0A1B0GTW7 788 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 NEMP2A6NFY4 417 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 DFFAO00273 331 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 PTPRAP18433 802 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SERPINB8P50452 374 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 MTX3Q5HYI7 312 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 NAPRTQ6XQN6 538 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 MAVSQ7Z434 540 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 CLVS1Q8IUQ0 354 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 DRAXINQ8NBI3 349 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 SLC2A14Q8TDB8 520 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 ELMO2Q96JJ3 720 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 CHCHD3Q9NX63 227 aaKnown RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SNNO75324 88 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 PMPCBO75439 489 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 ARSAP15289 507 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 CKMT2P17540 419 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 IL4RP24394 825 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
VPS52-218ENST00000482399 ADIGQ0VDE8 80 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 LRRC8BQ6P9F7 803 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 PCYT2Q99447 389 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SLC39A3Q9BRY0 314 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SNTG2Q9NY99 539 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS52-218ENST00000482399 EMCNQ9ULC0 261 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 DOLKQ9UPQ8 538 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 CITO14578 2027 aa12.97□□□□□ -0.33
VPS52-218ENST00000482399 BCLAF3A2AJT9 711 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms