RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 CFAP57Q96MR6 1250 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 CAMK1GQ96NX5 476 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 NPY6RQ99463 290 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 STK33Q9BYT3 514 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 SLC32A1Q9H598 525 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 FBRSQ9HAH7 460 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 METTL5Q9NRN9 209 aaKnown RBP10.79□□□□□ -0.68
CPSF4-212ENST00000482251 FBXL12Q9NXK8 326 aa10.79□□□□□ -0.68
CPSF4-212ENST00000482251 NOCTQ9UK39 431 aaKnown RBP10.79□□□□□ -0.68
CPSF4-212ENST00000482251 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-212ENST00000482251 PLXNA2O75051 1894 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 A0A1B0GVT2 93 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 PLK4O00444 970 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 RNASEH1O60930 286 aaKnown RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 CNTN5O94779 1100 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 LSM8O95777 96 aaKnown RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SRPRAP08240 638 aaKnown RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 CEACAM1P13688 526 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SOX5P35711 763 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 GABRB2P47870 512 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 CSNK1EP49674 416 aaKnown RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 FAM193AP78312 1265 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ATP11AP98196 1134 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 BNC1Q01954 994 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 MYL5Q02045 173 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SEMA3BQ13214 749 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ZNF177Q13360 481 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 CDO1Q16878 200 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ACCSLQ4AC99 568 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 RAB6CQ53S08 254 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ALFQ53S48 1182 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 CT47A1Q5JQC4 288 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 Q6ZVU0 165 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SND1Q7KZF4 910 aaKnown RBP eCLIP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 FAM131BQ86XD5 332 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ZDHHC17Q8IUH5 632 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 MSANTD4Q8NCY6 345 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SLC30A5Q8TAD4 765 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 PTPRN2Q92932 1015 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 OMDQ99983 421 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 C11orf70Q9BRQ4 267 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 RAB6CQ9H0N0 254 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 MUC3BQ9H195 1237 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 WDCPQ9H6R7 721 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ANO10Q9NW15 660 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SLC25A13Q9UJS0 675 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 VPS28Q9UK41 221 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SIK3Q9Y2K2 1263 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 ITIH6Q6UXX5 1313 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 SPEGQ15772 3267 aa10.78□□□□□ -0.68
CPSF4-212ENST00000482251 TMEM131Q92545 1883 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 CACNA1EQ15878 2313 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 LGALS16A8MUM7 142 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SH3BP5O60239 455 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SNAP91O60641 907 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 IL1BP01584 269 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 RHOCP08134 193 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 CD59P13987 128 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 ZNF18P17022 549 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 CHRNB2P17787 502 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 CXCR3P49682 368 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 JAM2P57087 298 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 FMO1Q01740 532 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 ZBTB16Q05516 673 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SLC25A52Q3SY17 297 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 CCDC183Q5T5S1 534 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 NCEH1Q6PIU2 408 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 LRSAM1Q6UWE0 723 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 PIP4P1Q86T03 277 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 AADATQ8N5Z0 425 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SLC6A18Q96N87 628 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SGK2Q9HBY8 427 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 TM9SF3Q9HD45 589 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 SEPT11Q9NVA2 429 aaKnown RBP10.77□□□□□ -0.69
CPSF4-212ENST00000482251 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.69
CPSF4-212ENST00000482251 MPP6Q9NZW5 540 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 NCKAP1Q9Y2A7 1128 aa10.77□□□□□ -0.69
CPSF4-212ENST00000482251 TP53BP1Q12888 1972 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-212ENST00000482251 TARSL2A2RTX5 802 aaKnown RBP10.76□□□□□ -0.69
CPSF4-212ENST00000482251 E9PAM4 449 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 KCNK3O14649 394 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 HYAL3O43820 417 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-212ENST00000482251 SRGAP2O75044 1071 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 CLDN11O75508 207 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 GJB3O75712 270 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 CER1O95813 267 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 MBD3O95983 291 aa10.76□□□□□ -0.69
CPSF4-212ENST00000482251 IGHV4-34P06331 123 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms