RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ARL14Q8N4G2 192 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 CCDC150Q8NCX0 1101 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 IFI44Q8TCB0 444 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 PTPRN2Q92932 1015 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 ATXN7L3BQ96GX2 97 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 LRRC4Q9HBW1 653 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 ABCC13Q9NSE7 274 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 STARD5Q9NSY2 213 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 DMAC2Q9NW81 257 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 WDR70Q9NW82 654 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
HDAC6-224ENST00000481929 NYNRINQ9P2P1 1898 aaKnown RBP15.46■□□□□ 0.07
HDAC6-224ENST00000481929 MYO9AB2RTY4 2548 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 LY6G6EA0A0G2JKS1 128 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 A0A1W2PNU3 283 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-224ENST00000481929 NEMP2A6NFY4 417 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 CDRT15L2A8MXV6 281 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 ACSL4O60488 711 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 RNGTTO60942 597 aaKnown RBP15.46■□□□□ 0.07
HDAC6-224ENST00000481929 GIMD1P0DJR0 217 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 MYF5P13349 255 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 ADIGQ0VDE8 80 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 ARHGAP17Q68EM7 881 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 FOXR1Q6PIV2 292 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 ANKRD52Q8NB46 1076 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 FAM131CQ96AQ9 280 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 PRICKLE1Q96MT3 831 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-224ENST00000481929 SPAG5Q96R06 1193 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 DDX50Q9BQ39 737 aaKnown RBP15.46■□□□□ 0.07
HDAC6-224ENST00000481929 DUSP23Q9BVJ7 150 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 U3KQA8 63 aa15.46■□□□□ 0.07
HDAC6-224ENST00000481929 YJEFN3A6XGL0 299 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 E7ENQ6 273 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 SUV39H1O43463 412 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 CD2BP2O95400 341 aaKnown RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 IGLV3-27P01718 113 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 AFPP02771 609 aaKnown RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 TGM2P21980 687 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 NNMTP40261 264 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 MLLT3P42568 568 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 METAP1P53582 386 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 RPS24P62847 133 aaKnown RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 LINC00303Q3SY05 128 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 C1orf220Q5T0J3 134 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 MMS22LQ6ZRQ5 1243 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 DSG4Q86SJ6 1040 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 CLEC14AQ86T13 490 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 SIX6OS1Q8N1H7 587 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 TTC39CQ8N584 583 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 IQUBQ8NA54 791 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 SLC4A11Q8NBS3 891 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 TAS1R2Q8TE23 839 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 PRR11Q96HE9 360 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 RPL10LQ96L21 214 aaKnown RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 USP28Q96RU2 1077 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 MYOCQ99972 504 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 CALN1Q9BXU9 219 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 BLZF1Q9H2G9 400 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 ATXN7L1Q9ULK2 861 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 ENTPD2Q9Y5L3 495 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 NOTCH2Q04721 2471 aa15.45■□□□□ 0.06
HDAC6-224ENST00000481929 TDRD6O60522 2096 aaKnown RBP15.45■□□□□ 0.06
HDAC6-224ENST00000481929 TULP2O00295 520 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 XPO1O14980 1071 aaKnown RBP15.44■□□□□ 0.06
HDAC6-224ENST00000481929 SCAMP1O15126 338 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 NR3C1P04150 777 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 GP1BBP13224 206 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 PDCP20941 246 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 CASP1P29466 404 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 STK19P49842 368 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-224ENST00000481929 VAMP7P51809 220 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 GOLGA7BQ2TAP0 167 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 FSCBQ5H9T9 825 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 FAM46CQ5VWP2 391 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 CEP135Q66GS9 1140 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 NADSYN1Q6IA69 706 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 MSANTD2Q6P1R3 559 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 RBM44Q6ZP01 1051 aaKnown RBP15.44■□□□□ 0.06
HDAC6-224ENST00000481929 USP53Q70EK8 1073 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 TMEM145Q8NBT3 493 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 TMEM174Q8WUU8 243 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 EXTL1Q92935 676 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 AZIN2Q96A70 460 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 SEPT3Q9UH03 358 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 FRMD4BQ9Y2L6 1034 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 DOCK9Q9BZ29 2069 aa15.44■□□□□ 0.06
HDAC6-224ENST00000481929 PVALEFA0A1B0GWK0 134 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 K7ESM1 405 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 SLC31A1O15431 190 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 TNFSF15O95150 251 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 LUC7L3O95232 432 aaKnown RBP15.43■□□□□ 0.06
HDAC6-224ENST00000481929 GJB6O95452 261 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 ITGB2P05107 769 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 CENPBP07199 599 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-224ENST00000481929 SFTPCP11686 197 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 VAV1P15498 845 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 GCLMP48507 274 aa15.43■□□□□ 0.06
HDAC6-224ENST00000481929 RAD23BP54727 409 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms