RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CER1O95813 267 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 IGHV4-34P06331 123 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 CD27P26842 260 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 SLC8A1P32418 973 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 GALCP54803 685 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 KCNJ12Q14500 433 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 RABGAP1LQ5R372 815 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 KLHDC7AQ5VTJ3 777 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 TAF3Q5VWG9 929 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 KIAA0895LQ68EN5 471 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 NCEH1Q6PIU2 408 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 IL27RAQ6UWB1 636 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 USP30Q70CQ3 517 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 SLC26A9Q7LBE3 791 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 OMDQ99983 421 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 SIK2Q9H0K1 926 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 EBF2Q9HAK2 575 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 ANLNQ9NQW6 1124 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 ANKRD6Q9Y2G4 727 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 PLXNA2O75051 1894 aa19.13■□□□□ 0.65
CLK1-211ENST00000481641 NYNRINQ9P2P1 1898 aaKnown RBP19.13■□□□□ 0.65
CLK1-211ENST00000481641 A0A1B0GVM2 712 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 TCAF2A6NFQ2 919 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 PLK4O00444 970 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 CBFA2T3O75081 653 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 PAGE1O75459 146 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 NOS2P35228 1153 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 HNRNPDQ14103 355 aaKnown RBP19.12■□□□□ 0.65
CLK1-211ENST00000481641 C2CD6Q53TS8 623 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 AADATQ8N5Z0 425 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 ZNF397Q8NF99 534 aaPredicted RBP19.12■□□□□ 0.65
CLK1-211ENST00000481641 ALG14Q96F25 216 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 PIGVQ9NUD9 493 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 PCOLCE2Q9UKZ9 415 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 ZMIZ1Q9ULJ6 1067 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 SCML1Q9UN30 329 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 NEUROG3Q9Y4Z2 214 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 CFAP47Q6ZTR5 3102 aa19.12■□□□□ 0.65
CLK1-211ENST00000481641 I6L893 689 aaPredicted RBP19.11■□□□□ 0.65
CLK1-211ENST00000481641 ADCY5O95622 1261 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 FTH1P19P0C7X4 201 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 CYP11B1P15538 503 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 PLK1P53350 603 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 METAP1P53582 386 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 SNX16P57768 344 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 BPIFB4P59827 614 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 SLC12A1Q13621 1099 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 TEAD4Q15561 434 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 TTC39BQ5VTQ0 682 aaPredicted RBP19.11■□□□□ 0.65
CLK1-211ENST00000481641 RAB44Q7Z6P3 723 aaPredicted RBP19.11■□□□□ 0.65
CLK1-211ENST00000481641 SLCO6A1Q86UG4 719 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 TMEM35BQ8NCS4 154 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 SLC6A18Q96N87 628 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 NPY6RQ99463 290 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 NAA15Q9BXJ9 866 aaKnown RBP19.11■□□□□ 0.65
CLK1-211ENST00000481641 OSGEPQ9NPF4 335 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 TMPRSS4Q9NRS4 437 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 TAB2Q9NYJ8 693 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLK1-211ENST00000481641 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 BTBD3Q9Y2F9 522 aa19.11■□□□□ 0.65
CLK1-211ENST00000481641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.1■□□□□ 0.65
CLK1-211ENST00000481641 CNTN5O94779 1100 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 IL1BP01584 269 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 ZNF883P0CG24 379 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 NNMTP40261 264 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 GRIA4P48058 902 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 SULT1E1P49888 294 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 ZNF177Q13360 481 aaPredicted RBP19.1■□□□□ 0.65
CLK1-211ENST00000481641 ZNF423Q2M1K9 1284 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 TCP11X2Q5H9J9 407 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 NOP9Q86U38 636 aaKnown RBP19.1■□□□□ 0.65
CLK1-211ENST00000481641 KDF1Q8NAX2 398 aaPredicted RBP19.1■□□□□ 0.65
CLK1-211ENST00000481641 FRS2Q8WU20 508 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 TBCBQ99426 244 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 FEM1AQ9BSK4 669 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 TKTL2Q9H0I9 626 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 LMBRD1Q9NUN5 540 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 ADAMTS1Q9UHI8 967 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 MSRB2Q9Y3D2 182 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 ZFHX4Q86UP3 3567 aa19.1■□□□□ 0.65
CLK1-211ENST00000481641 A0A1W2PPC4 97 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 H0Y8X5 98 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 WNT9AO14904 365 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 TRIM16O95361 564 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 UCHL3P15374 230 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 GOT1P17174 413 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 CDH5P33151 784 aaPredicted RBP19.09■□□□□ 0.65
CLK1-211ENST00000481641 RDXP35241 583 aaKnown RBP19.09■□□□□ 0.65
CLK1-211ENST00000481641 CXCR3P49682 368 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 KLK7P49862 253 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 IL9RQ01113 521 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 SULT2A1Q06520 285 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 ACCSLQ4AC99 568 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 ALFQ53S48 1182 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 PRAMEF14Q5SWL7 426 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 FAM102AQ5T9C2 384 aaPredicted RBP19.09■□□□□ 0.65
CLK1-211ENST00000481641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.09■□□□□ 0.65
CLK1-211ENST00000481641 DBX2Q6ZNG2 339 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms