RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CADM4Q8NFZ8 388 aa17.52■□□□□ 0.4
HSPG2-209ENST00000480900 C1orf74Q96LT6 269 aa17.52■□□□□ 0.4
HSPG2-209ENST00000480900 AGPAT1Q99943 283 aa17.52■□□□□ 0.4
HSPG2-209ENST00000480900 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
HSPG2-209ENST00000480900 NUSAP1Q9BXS6 441 aaKnown RBP17.52■□□□□ 0.4
HSPG2-209ENST00000480900 RSPH9Q9H1X1 276 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-209ENST00000480900 ADAM22Q9P0K1 906 aa17.52■□□□□ 0.4
HSPG2-209ENST00000480900 A0A1B0GTH6 734 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 EDDM13A0A1B0GTR0 161 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 SYCE3A1L190 88 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 TARSL2A2RTX5 802 aaKnown RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 ENDOD1O94919 500 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 CALB1P05937 261 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 MZF1P28698 734 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 CDH4P55283 916 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 RPS14P62263 151 aaKnown RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 TTC31Q49AM3 519 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 SYCP2LQ5T4T6 812 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 RNF219Q5W0B1 726 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 ZNF776Q68DI1 518 aaPredicted RBP17.51■□□□□ 0.39
HSPG2-209ENST00000480900 EMC1Q8N766 993 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 BAP1Q92560 729 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 HAPLN3Q96S86 360 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 GPR174Q9BXC1 333 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 PCED1AQ9H1Q7 454 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 TBC1D30Q9Y2I9 924 aa17.51■□□□□ 0.39
HSPG2-209ENST00000480900 IGLV3-10A0A075B6K4 115 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 TM4SF5O14894 197 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SIN3BO75182 1162 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 DNTTP04053 509 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SDC4P31431 198 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 NNMTP40261 264 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 PTPN9P43378 593 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-209ENST00000480900 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
HSPG2-209ENST00000480900 WDR45BQ5MNZ6 344 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 C9orf64Q5T6V5 341 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 LRRC31Q6UY01 552 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 MON1BQ7L1V2 547 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 ALG14Q96F25 216 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 RPL10LQ96L21 214 aaKnown RBP17.5■□□□□ 0.39
HSPG2-209ENST00000480900 FEM1AQ9BSK4 669 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 MTG2Q9H4K7 406 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 TMEM9BQ9NQ34 198 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SEPT11Q9NVA2 429 aaKnown RBP17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SLCO3A1Q9UIG8 710 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 SCML1Q9UN30 329 aa17.5■□□□□ 0.39
HSPG2-209ENST00000480900 C2CD4BA6NLJ0 364 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 DRGXA6NNA5 263 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 MEI4A8MW99 385 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 RNASEH1O60930 286 aaKnown RBP17.49■□□□□ 0.39
HSPG2-209ENST00000480900 CNTN5O94779 1100 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 CFIP05156 583 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 SERPINF2P08697 491 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 KRT3P12035 628 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 ATP11AP98196 1134 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 CCDC14Q49A88 953 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 IRF2BP2Q7Z5L9 587 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 SETD3Q86TU7 594 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-209ENST00000480900 FAM131BQ86XD5 332 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 C3orf20Q8ND61 904 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 OR52K2Q8NGK3 314 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 JOSD2Q8TAC2 188 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 DNASE2BQ8WZ79 361 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 CAPN10Q9HC96 672 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 TMPRSS4Q9NRS4 437 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 VPS28Q9UK41 221 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 SLC6A14Q9UN76 642 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 OR51B4Q9Y5P0 310 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 SNX10Q9Y5X0 201 aa17.49■□□□□ 0.39
HSPG2-209ENST00000480900 TP53BP1Q12888 1972 aaPredicted RBP17.49■□□□□ 0.39
HSPG2-209ENST00000480900 MED19A0JLT2 244 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 C4orf47A7E2U8 309 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 METTL12A8MUP2 240 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 E9PAM4 449 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 CDX4O14627 284 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 GNSP15586 552 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 STK19P49842 368 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 TPM4P67936 248 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 GFPT1Q06210 699 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 C15orf59Q2T9L4 293 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 ALFQ53S48 1182 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 PPP1R2P3Q6NXS1 205 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 STRADAQ7RTN6 431 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 PHLDB2Q86SQ0 1253 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 FAM124AQ86V42 546 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 RGL4Q8IZJ4 473 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 SELENOOQ9BVL4 669 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 MUC3BQ9H195 1237 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 PABPC3Q9H361 631 aaKnown RBP17.48■□□□□ 0.39
HSPG2-209ENST00000480900 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
HSPG2-209ENST00000480900 TCRBV5S1A1TA0A578 114 aa17.47■□□□□ 0.39
HSPG2-209ENST00000480900 LRRC53A6NM62 1247 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms