RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GLI1P08151 1106 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 MZF1P28698 734 aaPredicted RBP15.72■□□□□ 0.11
LIMS3-203ENST00000480744 GGCXP38435 758 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 CCT8P50990 548 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 C21orf59P57076 290 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SNX16P57768 344 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 IL9RQ01113 521 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SLC12A1Q13621 1099 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 ARID5BQ14865 1188 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 MAN2A1Q16706 1144 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 TTC39BQ5VTQ0 682 aaPredicted RBP15.72■□□□□ 0.11
LIMS3-203ENST00000480744 FBXL22Q6P050 247 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SLCO6A1Q86UG4 719 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SLC6A18Q96N87 628 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 FAM129BQ96TA1 746 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 PRMT1Q99873 361 aaKnown RBP15.72■□□□□ 0.11
LIMS3-203ENST00000480744 PDCL3Q9H2J4 239 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 SIX2Q9NPC8 291 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 VANGL2Q9ULK5 521 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 BTBD3Q9Y2F9 522 aa15.72■□□□□ 0.11
LIMS3-203ENST00000480744 A0A1W2PPC4 97 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 FAM170AA1A519 330 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 SRRM3A6NNA2 597 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 H0Y8X5 98 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 FOXN3O00409 490 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 DAB1O75553 588 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 ADH1BP00325 375 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 PRKCSHP14314 528 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 VAV1P15498 845 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 RACK1P63244 317 aaKnown RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 SULT2A1Q06520 285 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 EIF4EBP2Q13542 120 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 PTPN20Q4JDL3 420 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 KCNT1Q5JUK3 1230 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 OLFML1Q6UWY5 402 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 SND1Q7KZF4 910 aaKnown RBP eCLIP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 GLRX5Q86SX6 157 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 FAM114A1Q8IWE2 563 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 AADATQ8N5Z0 425 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 OR2T34Q8NGX1 318 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 OR14C36Q8NHC7 312 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 PTPRN2Q92932 1015 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 IGSF8Q969P0 613 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 CDC6Q99741 560 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 ORAI3Q9BRQ5 295 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 ACE2Q9BYF1 805 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-203ENST00000480744 AASDHPPTQ9NRN7 309 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 SLC25A13Q9UJS0 675 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 FZD4Q9ULV1 537 aa15.71■□□□□ 0.11
LIMS3-203ENST00000480744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 FAM221BA6H8Z2 402 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 M0QYT0 321 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ATXN1LP0C7T5 689 aaKnown RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 C5AR1P21730 350 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 CLCN1P35523 988 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 CTSKP43235 329 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 IRAK1P51617 712 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 OXCT1P55809 520 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 RNASE9P60153 205 aaKnown RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 SLC6A3Q01959 620 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ZNF177Q13360 481 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 RAPGEF1Q13905 1077 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ELAVL3Q14576 367 aaKnown RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ACCSLQ4AC99 568 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 CCDC157Q569K6 752 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 CXorf57Q6NSI4 855 aaKnown RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 BAHD1Q8TBE0 780 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-203ENST00000480744 SIK2Q9H0K1 926 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 CLSTN2Q9H4D0 955 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ADAMTS1Q9UHI8 967 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 HS3ST4Q9Y661 456 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 ASPMQ8IZT6 3477 aa15.7■□□□□ 0.1
LIMS3-203ENST00000480744 PLK4O00444 970 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 BNIP3LO60238 219 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 PAGE1O75459 146 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 GOT1P17174 413 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 NOS2P35228 1153 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 GRK6P43250 576 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 PLK1P53350 603 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 ADPRHP54922 357 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 KCNJ12Q14500 433 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 DPCR1Q3MIW9 517 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 VWA3BQ502W6 1294 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 PRAMEF14Q5SWL7 426 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.69■□□□□ 0.1
LIMS3-203ENST00000480744 DBX2Q6ZNG2 339 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 SLC26A9Q7LBE3 791 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 OR8D1Q8WZ84 308 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 SKA1Q96BD8 255 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 PPP1R9BQ96SB3 815 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 EBF2Q9HAK2 575 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 VPS28Q9UK41 221 aa15.69■□□□□ 0.1
LIMS3-203ENST00000480744 GOLGA4Q13439 2230 aaKnown RBP15.69■□□□□ 0.1
LIMS3-203ENST00000480744 FAM208BQ5VWN6 2430 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms