RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 C8orf4Q9NR00 106 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 TAF4O00268 1085 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 LDOC1O95751 146 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ACADLP28330 430 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CYP2C18P33260 490 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PTENP60484 403 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 MTDHQ86UE4 582 aaKnown RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 DNERQ8NFT8 737 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ELOVL4Q9GZR5 314 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 DEFB129Q9H1M3 183 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 HAO1Q9UJM8 370 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 GLRBP48167 497 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 SLC38A2Q96QD8 506 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PCDHB5Q9Y5E4 795 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PCDHGC5Q9Y5F6 944 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 MAGEC1O60732 1142 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 FAIM2Q9BWQ8 316 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CYP4F12Q9HCS2 524 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 MID1IP1Q9NPA3 183 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 NCOA3Q9Y6Q9 1424 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 OAZ1P54368 228 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ITFG1Q8TB96 612 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 BTBD10Q9BSF8 475 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 IL22Q9GZX6 179 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 BTBD7Q9P203 1132 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 SNX6Q9UNH7 406 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CLOCKO15516 846 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 SCNN1BP51168 640 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 SLC45A4Q5BKX6 768 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ARHGEF19Q8IW93 802 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ACOX2Q99424 681 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 F5P12259 2224 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 INPP4BO15327 924 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CCNT2O60583 730 aaKnown RBP9.71□□□□□ -0.85
VEGFA-212ENST00000480614 BIKQ13323 160 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 SETMARQ53H47 684 aaPredicted RBP9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF470Q6ECI4 717 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 USP45Q70EL2 814 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 GATAD2AQ86YP4 633 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 BCL2L14Q9BZR8 327 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 FGRP09769 529 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF410Q86VK4 478 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CHPFQ8IZ52 775 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 NOA1Q8NC60 698 aaKnown RBP9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CIPCQ9C0C6 399 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 KLHL1Q9NR64 748 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CATSPERZQ9NTU4 200 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 SORCS3Q9UPU3 1222 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 NWD1Q149M9 1564 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 TPP2P29144 1249 aaPredicted RBP9.71□□□□□ -0.85
VEGFA-212ENST00000480614 ZNHIT3Q15649 155 aaPredicted RBP9.71□□□□□ -0.85
VEGFA-212ENST00000480614 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 CCDC80Q76M96 950 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 OR2W6PQ8NHA6 318 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM39BQ9GZU3 492 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.85
VEGFA-212ENST00000480614 MYBL2P10244 700 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 NPTX2P47972 431 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 HUNKP57058 714 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 IL2P60568 153 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 INSCQ1MX18 579 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 CYP20A1Q6UW02 462 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 SCAIQ8N9R8 606 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 UBE2QL1A1L167 161 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 ME2P23368 584 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 KBTBD8Q8NFY9 601 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 ACTL9Q8TC94 416 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 FAM118BQ9BPY3 351 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 GNPTGQ9UJJ9 305 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 SH3GLB1Q9Y371 365 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 SHROOM3Q8TF72 1996 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 MAPK9P45984 424 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 CDK16Q00536 496 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 N4BP2L1Q5TBK1 243 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 SHCBP1LQ9BZQ2 653 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 INTS7Q9NVH2 962 aaKnown RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 S100A3P33764 101 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 GSTM5P46439 218 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF268Q14587 947 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 POU6F1Q14863 301 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 R3HDM1Q15032 1099 aaKnown RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 IZUMO2Q6UXV1 221 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 TXNRD3Q86VQ6 643 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 FAM126BQ8IXS8 530 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF34Q8IZ26 560 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 SPPL2AQ8TCT8 520 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 POLR1BQ9H9Y6 1135 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 ANAPC2Q9UJX6 822 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.86
VEGFA-212ENST00000480614 TSC22D2O75157 780 aa9.71□□□□□ -0.86
VEGFA-212ENST00000480614 KCNH1O95259 989 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms