RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 AZIN2Q96A70 460 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 GMEB1Q9Y692 573 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 VWA8A3KMH1 1905 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 TCRBV9S1A1TA0A576 114 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 GNRH1P01148 92 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 C1QAP02745 245 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 CXCR3P49682 368 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
SH3D21-203ENST00000480549 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 TP53INP2Q8IXH6 220 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 CKAP2Q8WWK9 683 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 SLC35B4Q969S0 331 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
SH3D21-203ENST00000480549 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 GLUD2P49448 558 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 TSPY1Q01534 308 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 YWHAHQ04917 246 aaPredicted RBP17.22■□□□□ 0.35
SH3D21-203ENST00000480549 ZBTB8BQ8NAP8 495 aaPredicted RBP17.22■□□□□ 0.35
SH3D21-203ENST00000480549 SCAMP5Q8TAC9 235 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 SPATA13Q96N96 652 aa17.22■□□□□ 0.35
SH3D21-203ENST00000480549 A0A1W2PPM1 405 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 TMEM189-UBE2V1I3L0A0 370 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 ARVCFO00192 962 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 PRPF4O43172 522 aaKnown RBP eCLIP17.21■□□□□ 0.358e-8■■■■□ 20.5
SH3D21-203ENST00000480549 CCNB1P14635 433 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 KRT15P19012 456 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 EPHB2P29323 1055 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 VHLP40337 213 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 TMED1Q13445 227 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 TAC4Q86UU9 113 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 P2RY11Q96G91 374 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 SENP1Q9P0U3 644 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 PDP2Q9P2J9 529 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 F9P00740 461 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 ERCC2P18074 760 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 HCAR3P49019 387 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 ARHGEF18Q6ZSZ5 1173 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 GDAP1Q8TB36 358 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 PRDM12Q9H4Q4 367 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 KLHL14Q9P2G3 628 aa17.21■□□□□ 0.35
SH3D21-203ENST00000480549 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SPAG7O75391 227 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SLC18A1P54219 525 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 LSAMPQ13449 338 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 EIF4EBP2Q13542 120 aaPredicted RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 ARHGAP18Q8N392 663 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SLAIN1Q8ND83 568 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 DENND1AQ8TEH3 1009 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 CYTH2Q99418 400 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 TTLL3Q9Y4R7 772 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 E2F6O75461 281 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SPAG6O75602 509 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 OR4Q2P0C623 313 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 WDR4P57081 412 aaKnown RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 PLOD1Q02809 727 aaPredicted RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 MGAT5Q09328 741 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 AP1B1Q10567 949 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 WASHC5Q12768 1159 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 GPNMBQ14956 572 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 PDK1Q15118 436 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 DENND5BQ6ZUT9 1274 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 LRRC8DQ7L1W4 858 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 C4orf33Q8N1A6 199 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 DQX1Q8TE96 717 aaKnown RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 DENND2DQ9H6A0 471 aaPredicted RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 MYO18AQ92614 2054 aaKnown RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 RNF103O00237 685 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 GRIA1P42261 906 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 TPI1P60174 286 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 BEND5Q7L4P6 421 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SPATA2LQ8IUW3 424 aaPredicted RBP17.2■□□□□ 0.34
SH3D21-203ENST00000480549 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SIGLEC10Q96LC7 697 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 TKTL2Q9H0I9 626 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 WDCPQ9H6R7 721 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 SNX10Q9Y5X0 201 aa17.2■□□□□ 0.34
SH3D21-203ENST00000480549 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 TYROBPO43914 113 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 SLC5A3P53794 718 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 ARL13BQ3SXY8 428 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 NPWQ8N729 165 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 ANKLE1Q8NAG6 615 aa17.19■□□□□ 0.34
SH3D21-203ENST00000480549 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms