RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SH3BP5LQ7L8J4 393 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 EEPD1Q7L9B9 569 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ADAMTSL2Q86TH1 951 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 IRF2BP1Q8IU81 584 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 COLGALT2Q8IYK4 626 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TMEM86AQ8N2M4 240 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TOP1MTQ969P6 601 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SPATA5L1Q9BVQ7 753 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ANKHQ9HCJ1 492 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CYLDQ9NQC7 956 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 GPRC5DQ9NZD1 345 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PIN4Q9Y237 131 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 USP20Q9Y2K6 914 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PRG3Q9Y2Y8 225 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 GLI2P10070 1586 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RTN3O95197 1032 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 LCP1P13796 627 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CCR1P32246 355 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 S100A3P33764 101 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RBM20Q5T481 1227 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZCCHC8Q6NZY4 707 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MCOLN3Q8TDD5 553 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ITPKCQ96DU7 683 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 OMA1Q96E52 524 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZFYVE19Q96K21 471 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 KIAA1683Q9H0B3 1180 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 KCTD10Q9H3F6 313 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RHOJQ9H4E5 214 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 FBXO44Q9H4M3 255 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ARHGEF3Q9NR81 526 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PPP2R3BQ9Y5P8 575 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CROCC2H7BZ55 1655 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 HAT1O14929 419 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SNPHO15079 494 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ATMINO43313 823 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PMPCBO75439 489 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ODC1P11926 461 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 NCAM1P13591 858 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 IDO1P14902 403 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MYL12AP19105 171 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PTX3P26022 381 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 NOS2P35228 1153 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SKP1P63208 163 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 HERC3Q15034 1050 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 GOLGA7BQ2TAP0 167 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 FBXO47Q5MNV8 452 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 STYK1Q6J9G0 422 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF605Q86T29 641 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TMEM132CQ8N3T6 1108 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CERS2Q96G23 380 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ATXN7L3BQ96GX2 97 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 HSD17B14Q9BPX1 270 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SERHL2Q9H4I8 314 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SERHLQ9NQF3 203 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SPASTQ9UBP0 616 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 BCLAF3A2AJT9 711 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CATP04040 527 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 BPGMP07738 259 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 LTA4HP09960 611 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CYP2F1P24903 491 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 HOXA10P31260 410 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ACTR3P61158 418 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MVKQ03426 396 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ACSM2AQ08AH3 577 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF177Q13360 481 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TSC22D1Q15714 1073 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 MFSD14CQ5VZR4 134 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ACSM2BQ68CK6 577 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 DENND5AQ6IQ26 1287 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 KCNT2Q6UVM3 1135 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RIPOR1Q6ZS17 1223 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 OTOP1Q7RTM1 612 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 NOP9Q86U38 636 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF410Q86VK4 478 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 HIPK1Q86Z02 1210 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CCDC36Q8IYA8 594 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 NKX2-3Q8TAU0 364 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC44A1Q8WWI5 657 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 FCGR1BQ92637 280 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RNF157Q96PX1 679 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 CHST7Q9NS84 486 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TBCCD1Q9NVR7 557 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RBM22Q9NW64 420 aaKnown RBP eCLIP6.26□□□□□ -1.414e-12■■■■■ 26.8
PRPF4B-205ENST00000480058 LNPEPQ9UIQ6 1025 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ZC3H4Q9UPT8 1303 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TCRBV5S4A2TA0A5A2 114 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 EIF4E1BA6NMX2 242 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 DPYSL4O14531 572 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 RGS14O43566 566 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PEX1O43933 1283 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 VCLP18206 1134 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 ACO1P21399 889 aaKnown RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 LRRC74AQ0VAA2 488 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 TMEM132BQ14DG7 1078 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 POLD3Q15054 466 aaPredicted RBP6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 BHLHB9Q6PI77 547 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 OTOAQ7RTW8 1153 aa6.26□□□□□ -1.41
PRPF4B-205ENST00000480058 PGAM4Q8N0Y7 254 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms