RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CPNE7Q9UBL6 633 aa4.33□□□□□ -1.72
CMSS1-204ENST00000479555 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.72
CMSS1-204ENST00000479555 PAIP2BQ9ULR5 123 aaKnown RBP4.33□□□□□ -1.72
CMSS1-204ENST00000479555 SCAF8Q9UPN6 1271 aaKnown RBP4.33□□□□□ -1.72
CMSS1-204ENST00000479555 COMMD10Q9Y6G5 202 aa4.33□□□□□ -1.72
CMSS1-204ENST00000479555 KDM6BO15054 1643 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 RNF17Q9BXT8 1623 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 NOS1P29475 1434 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PTCH1Q13635 1447 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 NUP155O75694 1391 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 hCG_1984214I3L0E3 225 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 FCHO1O14526 889 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 FIBPO43427 364 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PEX14O75381 377 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 RASSF9O75901 435 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 UNC5CO95185 931 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PENKP01210 267 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 GSTA1P08263 222 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 MYL3P08590 195 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC175P0C221 793 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PIM1P11309 404 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CYP19A1P11511 503 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CYP2C9P11712 490 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 HARSP12081 509 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 SLC5A1P13866 664 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PSMA5P28066 241 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 HOXD9P28356 352 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CCT5P48643 541 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 LRMPQ12912 555 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 STIM1Q13586 685 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PKP1Q13835 747 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 KBTBD12Q3ZCT8 623 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CMPK2Q5EBM0 449 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 WDR78Q5VTH9 848 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TTC19Q6DKK2 380 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PARS2Q7L3T8 475 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 FAM186BQ8IYM0 893 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 GALNT15Q8N3T1 639 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 AFAP1Q8N556 730 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 GJA10Q969M2 543 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 NMD3Q96D46 503 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC138Q96M89 665 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TRAPPC9Q96Q05 1148 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 RPS6KC1Q96S38 1066 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TBCBQ99426 244 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 MIS12Q9H081 205 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 UNC45AQ9H3U1 944 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 DCTPP1Q9H773 170 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 RMI1Q9H9A7 625 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 PAPOLBQ9NRJ5 636 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TRMT1Q9NXH9 659 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 LARSQ9P2J5 1176 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 SUN2Q9UH99 717 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CDC23Q9UJX2 597 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 BLOC1S6Q9UL45 172 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TMCO1Q9UM00 188 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CORO2BQ9UQ03 480 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF148Q9UQR1 794 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 EXOC6BQ9Y2D4 811 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 MRPS17Q9Y2R5 130 aaKnown RBP4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CDC42BPAQ5VT25 1732 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 LRRIQ1Q96JM4 1722 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 ABCA9Q8IUA7 1624 aa4.32□□□□□ -1.72
CMSS1-204ENST00000479555 TTC37Q6PGP7 1564 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TRAPPC8Q9Y2L5 1435 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 KIAA0232Q92628 1395 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CDHR2Q9BYE9 1310 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC162PA2VCL2 907 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CTAGE9A4FU28 777 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TRIM43BA6NCK2 446 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MBD3L4A6NDZ8 208 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MBD3L3A6NE82 208 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 NPHP1O15259 732 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 HSF2BPO75031 334 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SMIM24O75264 130 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 WDHD1O75717 1129 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TMCC1O94876 653 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 IL18RAPO95256 599 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC166P0CW27 439 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TROVE2P10155 538 aaKnown RBP eCLIP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SYT1P21579 422 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 IL1R2P27930 398 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCKARP32238 428 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 PIK3CBP42338 1070 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 TM4SF4P48230 202 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 RENBPP51606 427 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CCNHP51946 323 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 WNT3P56703 355 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 GNG11P61952 73 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 PRPF4BQ13523 1007 aaKnown RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 DAG1Q14118 895 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 MORC3Q14149 939 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF268Q14587 947 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 LONRF3Q496Y0 759 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 AWAT1Q58HT5 328 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 SPECC1Q5M775 1068 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 DEPDC1Q5TB30 811 aa4.31□□□□□ -1.72
CMSS1-204ENST00000479555 CPLX2Q6PUV4 134 aaKnown RBP4.31□□□□□ -1.72
CMSS1-204ENST00000479555 LAYNQ6UX15 382 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms