RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SLC8A1P32418 973 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 AUHQ13825 339 aaKnown RBP17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 TRIP6Q15654 476 aaKnown RBP17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 RAB6CQ53S08 254 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 KLHDC7AQ5VTJ3 777 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 FAM114A1Q8IWE2 563 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 FAM71AQ8IYT1 594 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 PTPRN2Q92932 1015 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 FAM81BQ96LP2 452 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 SLC6A18Q96N87 628 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 ORAI3Q9BRQ5 295 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 TRIM62Q9BVG3 475 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 TMEM121BQ9BXQ6 578 aaPredicted RBP17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 RAB6CQ9H0N0 254 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 TM7SF3Q9NS93 570 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 SLC12A6Q9UHW9 1150 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 PCDHB9Q9Y5E1 797 aa17.92■□□□□ 0.46
ECHDC1-216ENST00000479525 WNT9AO14904 365 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 MMEP08473 750 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 CYP11B1P15538 503 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 GALCP54803 685 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ACCSLQ4AC99 568 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ALFQ53S48 1182 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 FAM102AQ5T9C2 384 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 TRNP1Q6NT89 227 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 NOP9Q86U38 636 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 SLC20A1Q8WUM9 679 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 NOX5Q96PH1 765 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 TBCBQ99426 244 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 OMDQ99983 421 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ZMIZ1Q9ULJ6 1067 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 NCKAP1Q9Y2A7 1128 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ANKRD6Q9Y2G4 727 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 CABIN1Q9Y6J0 2220 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 EDDM13A0A1B0GTR0 161 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 A0A1B0GVM2 712 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 TCAF2A6NFQ2 919 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 UPK3BL1B0FP48 263 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 UPK3BL2E5RIL1 263 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 GJB6O95452 261 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 IL1BP01584 269 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 PROS1P07225 676 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 SRPRAP08240 638 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 FTH1P19P0C7X4 201 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 PPP2CBP62714 309 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 PPP2CAP67775 309 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 CCDC157Q569K6 752 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 RABGAP1LQ5R372 815 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 KIAA0895LQ68EN5 471 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 SLC26A9Q7LBE3 791 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 SLCO6A1Q86UG4 719 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ZNF557Q8N988 423 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 OR14C36Q8NHC7 312 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 CPA5Q8WXQ8 436 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 GATA6Q92908 595 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 TKTL2Q9H0I9 626 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 ASNSD1Q9NWL6 643 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 SARDHQ9UL12 918 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 NFE2L3Q9Y4A8 694 aa17.91■□□□□ 0.46
ECHDC1-216ENST00000479525 TDRD6O60522 2096 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 ITIH6Q6UXX5 1313 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 IGF2RP11717 2491 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 H0Y8X5 98 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 EPHB6O15197 1021 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 SNAP91O60641 907 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 RNASEH1O60930 286 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 GFPT2O94808 682 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 CER1O95813 267 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 WNT1P04628 370 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 GLI1P08151 1106 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 NOS2P35228 1153 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 FLT3P36888 993 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 TCP11X2Q5H9J9 407 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 Q6ZVU0 165 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 XYLT1Q86Y38 959 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 GPT2Q8TD30 523 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 ALG14Q96F25 216 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 NPY6RQ99463 290 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 NAA15Q9BXJ9 866 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 FBRSQ9HAH7 460 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 SGK2Q9HBY8 427 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 MPP6Q9NZW5 540 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 PCOLCE2Q9UKZ9 415 aa17.9■□□□□ 0.46
ECHDC1-216ENST00000479525 RNF103O00237 685 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 UCHL3P15374 230 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 GLDCP23378 1020 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 CD27P26842 260 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 ERCC5P28715 1186 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 MAT2AP31153 395 aaKnown RBP17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 ZBTB16Q05516 673 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 DEUP1Q05D60 604 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms