RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZNF669Q96BR6 464 aaPredicted RBP25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 PGAP3Q96FM1 320 aaPredicted RBP25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 CDH19Q9H159 772 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 GBA3Q9H227 469 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 PIH1D1Q9NWS0 290 aaKnown RBP25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 SCN4AP35499 1836 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 PRKAA2P54646 552 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 EPGNQ6UW88 154 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 RDH11Q8TC12 318 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 IFT43Q96FT9 208 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 CEP41Q9BYV8 373 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 NSMCE4AQ9NXX6 385 aa25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 PIN4Q9Y237 131 aaKnown RBP25.17■■□□□ 1.62
SYNGAP1-206ENST00000479510 ZCWPW2A0A1B0GU75 182 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ARHGAP42A6NI28 874 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ERCC2P18074 760 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 CYP2B6P20813 491 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ACAT1P24752 427 aaKnown RBP25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ARRB2P32121 409 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 NUMBP49757 651 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 PSEN1P49768 467 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 TUBP50607 506 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 CCNHP51946 323 aaPredicted RBP25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SLC25A3Q00325 362 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 HNRNPDQ14103 355 aaKnown RBP25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 UBXN11Q5T124 520 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 FSTL4Q6MZW2 842 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 CLEC20AQ6ZU45 233 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 PAQR9Q6ZVX9 377 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 NDRG1Q92597 394 aaKnown RBP25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 HDAC11Q96DB2 347 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 TRAPPC9Q96Q05 1148 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 GORASP1Q9BQQ3 440 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ZDHHC7Q9NXF8 308 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 TSC2P49815 1807 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 MEI4A8MW99 385 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 GABRDO14764 452 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 F2P00734 622 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 FESP07332 822 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 DNAJB1P25685 340 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SOX4Q06945 474 aaPredicted RBP25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 NME3Q13232 169 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SNX17Q15036 470 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SYPL2Q5VXT5 272 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 IZUMO2Q6UXV1 221 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 DPP9Q86TI2 863 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SLC7A14Q8TBB6 771 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 MAML3Q96JK9 1138 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 MCMBPQ9BTE3 642 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 YIPF3Q9GZM5 350 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 PPM1HQ9ULR3 514 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 ANKRD6Q9Y2G4 727 aa25.16■■□□□ 1.62
SYNGAP1-206ENST00000479510 SBF1O95248 1867 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 ZNF236Q9UL36 1845 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 EIF4E1BA6NMX2 242 aaKnown RBP25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 AHCYL1O43865 530 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 TRIM13O60858 407 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 TPI1P60174 286 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 ARL13BQ3SXY8 428 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 USP50Q70EL3 339 aaPredicted RBP25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 GSTCDQ8NEC7 633 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 PPP2R3CQ969Q6 453 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 IL22Q9GZX6 179 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 CNGB3Q9NQW8 809 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 TMPRSS4Q9NRS4 437 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 KLK14Q9P0G3 267 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 FBXW11Q9UKB1 542 aa25.15■■□□□ 1.62
SYNGAP1-206ENST00000479510 A0A096LPK6 155 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CCDC189A1A4V9 331 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 G3V2L1 256 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 KCNK1O00180 336 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 PSMD3O43242 534 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 BUD23O43709 281 aaKnown RBP25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 HSPA4LO95757 839 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 FAM200BP0CF97 657 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 TKTL1P51854 596 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CACNA2D1P54289 1103 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 GRB14Q14449 540 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CFAP157Q5JU67 520 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CES3Q6UWW8 571 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 ATG14Q6ZNE5 492 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CMC1Q7Z7K0 106 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 DHDDSQ86SQ9 333 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 TTC1Q99614 292 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 TINF2Q9BSI4 451 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 FAM192AQ9GZU8 254 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 WDR6Q9NNW5 1121 aaKnown RBP25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 CDH22Q9UJ99 828 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 ARHGAP26Q9UNA1 814 aa25.14■■□□□ 1.62
SYNGAP1-206ENST00000479510 SYNJ2BP-COX16A0A087WUM0 186 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 BAG2O95816 211 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 GALNT2Q10471 571 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 DNAAF3Q8N9W5 541 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 URGCPQ8TCY9 931 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 LBHD1Q9BQE6 289 aaPredicted RBP25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 RTKNQ9BST9 563 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 COX16Q9P0S2 106 aa25.14■■□□□ 1.61
SYNGAP1-206ENST00000479510 MYO18AQ92614 2054 aaKnown RBP25.13■■□□□ 1.61
SYNGAP1-206ENST00000479510 SLC22A2O15244 555 aa25.13■■□□□ 1.61
SYNGAP1-206ENST00000479510 BEST1O76090 585 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms