RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDK11A-216ENST00000479362 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 DDX56Q9NY93 547 aaKnown RBP10.74□□□□□ -0.69
CDK11A-216ENST00000479362 GDE1Q9NZC3 331 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 DNAI1Q9UI46 699 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 FZD10Q9ULW2 581 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 ARHGAP26Q9UNA1 814 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 AP4E1Q9UPM8 1137 aa10.74□□□□□ -0.69
CDK11A-216ENST00000479362 ACACAQ13085 2346 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 CACNA1EQ15878 2313 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KCNU1A8MYU2 1149 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 DDX3YO15523 660 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 PAPSS2O95340 614 aaPredicted RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 PRAMEF12O95522 483 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 RARAP10276 462 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 CORO1AP31146 461 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 CASQ1P31415 396 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ADRA1BP35368 520 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 HARS2P49590 506 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 RWDD2BP57060 319 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 USP4Q13107 963 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 MTA1Q13330 715 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 BOLA3Q53S33 107 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ODF2Q5BJF6 829 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KCNT1Q5JUK3 1230 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ERMARDQ5T6L9 678 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 TXNRD3NBQ6F5E7 133 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KIAA1211LQ6NV74 962 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 PSTKQ8IV42 348 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KATNAL2Q8IYT4 538 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 TTC16Q8NEE8 873 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ZSCAN18Q8TBC5 510 aaPredicted RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 HSPH1Q92598 858 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 USP13Q92995 863 aaPredicted RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 LOXL4Q96JB6 756 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 BTN2A3PQ96KV6 586 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ZSWIM3Q96MP5 696 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 DHX35Q9H5Z1 703 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KIF9Q9HAQ2 790 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 LMAN1LQ9HAT1 526 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 TMPRSS4Q9NRS4 437 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 GKN1Q9NS71 199 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 IGSF5Q9NSI5 407 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 TDP1Q9NUW8 608 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 C2orf42Q9NWW7 574 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 CFAP97Q9P2B7 532 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 SLC12A6Q9UHW9 1150 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 LSM7Q9UK45 103 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 KLK13Q9UKR3 277 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 PCDHA3Q9Y5H8 950 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ASCC3Q8N3C0 2202 aaKnown RBP10.73□□□□□ -0.69
CDK11A-216ENST00000479362 ASXL3Q9C0F0 2248 aa10.73□□□□□ -0.69
CDK11A-216ENST00000479362 DOCK4Q8N1I0 1966 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 APC2O95996 2303 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 LRRD1A4D1F6 860 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 C4orf47A7E2U8 309 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 I6L893 689 aaPredicted RBP10.72□□□□□ -0.69
CDK11A-216ENST00000479362 LEFTY2O00292 366 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 FANCGO15287 622 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 HYAL3O43820 417 aaPredicted RBP10.72□□□□□ -0.69
CDK11A-216ENST00000479362 PAGE1O75459 146 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 CHRNB1P11230 501 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 WEE1P30291 646 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 SLC11A2P49281 568 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 CDH6P55285 790 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 KRT81Q14533 505 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 CA9Q16790 459 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 ATP13A4Q4VNC1 1196 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 DENND1CQ8IV53 801 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 SPEM1Q8N4L4 309 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 SH3RF2Q8TEC5 729 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 ALG3Q92685 438 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 DNASE1L2Q92874 299 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 RBM41Q96IZ5 413 aaKnown RBP10.72□□□□□ -0.69
CDK11A-216ENST00000479362 ASB16Q96NS5 453 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 HAPLN3Q96S86 360 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 PSMB7Q99436 277 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 EDEM2Q9BV94 578 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 ANLNQ9NQW6 1124 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 XPO7Q9UIA9 1087 aaKnown RBP10.72□□□□□ -0.69
CDK11A-216ENST00000479362 CCL26Q9Y258 94 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 MSRB2Q9Y3D2 182 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 HS3ST4Q9Y661 456 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 NUP205Q92621 2012 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 PCNX2A6NKB5 2137 aa10.72□□□□□ -0.69
CDK11A-216ENST00000479362 MAN2B1O00754 1011 aa10.71□□□□□ -0.69
CDK11A-216ENST00000479362 KCNK3O14649 394 aa10.71□□□□□ -0.69
CDK11A-216ENST00000479362 ACSL4O60488 711 aa10.71□□□□□ -0.69
CDK11A-216ENST00000479362 ECI2O75521 394 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms