RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 PCDH8O95206 1070 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 SLC16A8O95907 504 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 BTDP43251 543 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 VAMP2P63027 116 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 UBXN11Q5T124 520 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ATCAYQ86WG3 371 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 EMC1Q8N766 993 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 OR5J2Q8NH18 312 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 REXO5Q96IC2 774 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ADD3Q9UEY8 706 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 UBQLN1Q9UMX0 589 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TNFAIP8O95379 198 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 MXD1Q05195 221 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 SLC16A9Q7RTY1 509 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PARGQ86W56 976 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PNMA5Q96PV4 448 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PHTF1Q9UMS5 762 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 KDM6BO15054 1643 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 NEDD8-MDP1E9PL57 170 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 RBM6P78332 1123 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 DENND1BQ6P3S1 775 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 AMIGO1Q86WK6 493 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ARHGAP12Q8IWW6 846 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 RNPC3Q96LT9 517 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 JSRP1Q96MG2 331 aaPredicted RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PIH1D1Q9NWS0 290 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 RDH8Q9NYR8 311 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 LSM7Q9UK45 103 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 RGS14O43566 566 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 AP2A2O94973 939 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 EPORP19235 508 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 FASP25445 335 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 RHEBQ15382 184 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 NR6A1Q15406 480 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 SYT16Q17RD7 645 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF550Q7Z398 422 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TRMT11Q7Z4G4 463 aaKnown RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF669Q96BR6 464 aaPredicted RBP11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 A0A0A6YYH2 397 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 A6NJ64 397 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 CASKO14936 926 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 SOAT2O75908 522 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 PLATP00750 562 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ARPC4P59998 168 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 AMHR2Q16671 573 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 MFSD7Q6UXD7 560 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TTC7BQ86TV6 843 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 ATAD1Q8NBU5 361 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 TNKSO95271 1327 aa11.18□□□□□ -0.62
EWSR1-216ENST00000479135 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CMA1P23946 247 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 GNALP38405 381 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CDK17Q00537 523 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 NET1Q7Z628 596 aaPredicted RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CAMK1DQ8IU85 385 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FSTL5Q8N475 847 aaPredicted RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 UBA3Q8TBC4 463 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 PSMD13Q9UNM6 376 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 MYRFQ9Y2G1 1151 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 MAP3K5Q99683 1374 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CHRM5P08912 532 aaPredicted RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 RIN1Q13671 783 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CCNG2Q16589 344 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 AAGABQ6PD74 315 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FAM71DQ8N9W8 422 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 TPRKBQ9Y3C4 175 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 VAMP4O75379 141 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 SERPINA1P01009 418 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 CTSHP09668 335 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FRMD7Q6ZUT3 714 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 PYDC1Q8WXC3 89 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 RAD54LQ92698 747 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
EWSR1-216ENST00000479135 FARSAQ9Y285 508 aaKnown RBP11.17□□□□□ -0.62
EWSR1-216ENST00000479135 PTPRTO14522 1441 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms