RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PLIN4Q96Q06 1357 aa21.68■■□□□ 1.06
SDF4-206ENST00000478938 E2F8A0AVK6 867 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 ILVBLA1L0T0 632 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 C9IYK1 514 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 DLGAP1O14490 977 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 TIPRLO75663 272 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 GABBR2O75899 941 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 TAL1P17542 331 aaPredicted RBP21.67■■□□□ 1.06
SDF4-206ENST00000478938 POLR2IP36954 125 aaKnown RBP21.67■■□□□ 1.06
SDF4-206ENST00000478938 AP3M2P53677 418 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 QRICH1Q2TAL8 776 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 CYP2R1Q6VVX0 501 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 SLC43A3Q8NBI5 491 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 MCEEQ96PE7 176 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 NPAS2Q99743 824 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 C17orf80Q9BSJ5 609 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 TTC34A8MYJ7 566 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 C6orf229H3BNL8 230 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 GPR25O00155 361 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 PTPN7P35236 360 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 PRKCQQ04759 706 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 CLCQ05315 142 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 KCNJ11Q14654 390 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 HEATR4Q86WZ0 1026 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 SPERTQ8NA61 448 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 CELF1Q92879 486 aaKnown RBP21.67■■□□□ 1.06
SDF4-206ENST00000478938 VRTNQ9H8Y1 702 aa21.67■■□□□ 1.06
SDF4-206ENST00000478938 IL2RBP14784 551 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 KCNA2P16389 499 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 PTK2BQ14289 1009 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 MAPRE1Q15691 268 aaKnown RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 MAPK11Q15759 364 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 KCNT1Q5JUK3 1230 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 SLC10A5Q5PT55 438 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 FAXCQ5TGI0 409 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 AKAP14Q86UN6 197 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 ADI1Q9BV57 179 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 RAD21L1Q9H4I0 556 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 TCAF1Q9Y4C2 921 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 C3orf70A6NLC5 250 aaPredicted RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 IL18RAPO95256 599 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 RALBP11234 206 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 HARS2P49590 506 aaKnown RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 NLRP11P59045 1033 aaKnown RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 ATP6V0D1P61421 351 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 GRSF1Q12849 480 aaKnown RBP eCLIP21.66■■□□□ 1.06
SDF4-206ENST00000478938 UBE2UQ5VVX9 321 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 CCDC60Q8IWA6 550 aaPredicted RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 CBR4Q8N4T8 237 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 GOLM1Q8NBJ4 401 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 OR13F1Q8NGS4 319 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 RP9Q8TA86 221 aaKnown RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 APBB2Q92870 758 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 FAF2Q96CS3 445 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 GLT1D1Q96MS3 346 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 IL12RB2Q99665 862 aa21.66■■□□□ 1.06
SDF4-206ENST00000478938 FBXO9Q9UK97 447 aaPredicted RBP21.66■■□□□ 1.06
SDF4-206ENST00000478938 TNPO2O14787 897 aaKnown RBP21.65■■□□□ 1.06
SDF4-206ENST00000478938 PMM2O15305 246 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 ABCB1P08183 1280 aaPredicted RBP21.65■■□□□ 1.06
SDF4-206ENST00000478938 SNRNP35Q16560 246 aaKnown RBP21.65■■□□□ 1.06
SDF4-206ENST00000478938 Q3C1V9 767 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 BTBD8Q5XKL5 378 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 PPP4R4Q6NUP7 873 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 CYGBQ8WWM9 190 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TRIM38O00635 465 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 ICMTO60725 284 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 CRYZL1O95825 349 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 PRKCGP05129 697 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 PRKACBP22694 351 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TMBIM6P55061 237 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 SNAP25P60880 206 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 LRIT3Q3SXY7 679 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TMEM198Q66K66 360 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TMC5Q6UXY8 1006 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 UNC5AQ6ZN44 842 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 MINDY2Q8NBR6 621 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 MED30Q96HR3 178 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 FANCEQ9HB96 536 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TMEM8AQ9HCN3 771 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 QPCTLQ9NXS2 382 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 PSME2Q9UL46 239 aa21.65■■□□□ 1.06
SDF4-206ENST00000478938 TMEM191CA6NGB0 347 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 TOR1BO14657 336 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 NRP1O14786 923 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 TMEM191BP0C7N4 346 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 NUMBP49757 651 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 RPS6P62753 249 aaKnown RBP21.64■■□□□ 1.06
SDF4-206ENST00000478938 PHC1P78364 1004 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 RHDQ02161 417 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 DPP8Q6V1X1 898 aaPredicted RBP21.64■■□□□ 1.06
SDF4-206ENST00000478938 PLEKHG7Q6ZR37 379 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 PDPRQ8NCN5 879 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 HCAR2Q8TDS4 363 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 ASB9Q96DX5 294 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 ATP13A3Q9H7F0 1226 aa21.64■■□□□ 1.06
SDF4-206ENST00000478938 RMND5AQ9H871 391 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms